Array 1 182296-179768 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHPT010000004.1 Klebsiella pneumoniae isolate Kp5141, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182295 29 100.0 32 ............................. TTAACCATTCTCCCCGGCTCAGTACCTGCCCG 182234 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 182173 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 182112 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 182051 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 181989 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 181928 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 181867 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 181806 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 181745 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 181684 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181623 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181562 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181501 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 181440 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181379 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181318 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 181257 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 181196 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 181135 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 181074 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 181013 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 180952 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 180891 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 180830 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 180769 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180708 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180647 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180586 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180525 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180464 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 180403 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 180342 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 180281 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 180220 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 180159 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 180098 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 180037 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 179976 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 179915 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 179854 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179796 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //