Array 1 194888-196954 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUDF01000001.1 Eubacterium sp. AM05-23 AM05-23.Scaf1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 194888 30 100.0 37 .............................. GGTATTTCCAGTGTCGTGGATGAACGAACAGATCAAA 194955 30 100.0 35 .............................. CGTCTTCAGAGATTTCTTCAAATTTTCCTTTATAG 195020 30 100.0 36 .............................. GCTTGAAAAGTTCAAGTCCTGCGTCTATTGGTGCAT 195086 30 100.0 36 .............................. CCTAAATCCCACTCGGCGCGATAGTCGTCTGTTTTT 195152 30 100.0 36 .............................. CAAGTCTGGAGCCCTTTTATAAAGTCAATCATGGCA 195218 30 100.0 36 .............................. AGTTTAGGAGGACGAAATGGAAAATTTTACCGTTAG 195284 30 100.0 35 .............................. TTCTTCTTTCTTGTTTCAAATATTCAACTGCATCC 195349 30 100.0 36 .............................. GCCTGGCCATGGCCGGCCTGGTCAGCCAGGGCAAGC 195415 30 100.0 36 .............................. AGAACTAGCTGACCAGATTCTGACCTATGGTATCCT 195481 30 100.0 35 .............................. AAAACAGCGCCATTATCCGATGGTTATTGAAGTTT 195546 30 100.0 36 .............................. AGATACATATCAAGTACAGCCTGCATTTTTAGATGA 195612 30 100.0 34 .............................. TATTTTGGTGCATTCTTACCCAACTTTCCAGCCG 195676 30 100.0 37 .............................. TTTAAACATCGTGCATTCGTTTCTTGTTGGTACGTTT 195743 30 100.0 36 .............................. TATGGCATTAAGAAAGTCTCAAAATACTGGTTTTTC 195809 30 100.0 34 .............................. TCAGCAACTCAGGTTTATTTGTTTATATACACTG 195873 30 100.0 37 .............................. AATAAAGGAGAAAAACAAATGAAAACAACAGTAGAAC 195940 30 100.0 35 .............................. AATAGTTTGCATTATTGTAAGGTGGAATGTATAAT 196005 30 100.0 37 .............................. AACAGCCAATGCAGATGTAGCAGCCCTGTCCTGGATA 196072 30 100.0 37 .............................. GCTGATTCAGGAGGCGCTACCCTATACCGCAGAAATT 196139 30 100.0 35 .............................. TTTTCAAGCATTGAACGCGTTTCATCTTTGATGTC 196204 30 100.0 35 .............................. AAGTAAAGGGCTTCAGCGTCTTTTCGGGTTTTCAC 196269 30 100.0 36 .............................. TTAATCAAGCTTGCTTCAAGCCCCCCTTTAAAACAA 196335 30 100.0 36 .............................. TATGCTAACAGAAATCGAACAAAAAGTATTGTATAA 196401 30 100.0 36 .............................. CGTTCTTTAAAAAAGGTTGGTACATCCATCACTCCC 196467 30 100.0 35 .............................. AAGGATATGTTGAAATCCCTGGATTGGGCAAAGGG 196532 30 100.0 35 .............................. TAATAAAAAAGCCGCACGTTAAGTGCGGCGTATTC 196597 30 100.0 36 .............................. CCTTTTTGCTTCCCTTTATACTTTCGACTTCTTCTT 196663 30 100.0 37 .............................. CTGGTAATTTGTCTAAATAGTAATGAATACAGCCATA 196730 30 100.0 36 .............................. GTAATCATGCGTTTAAATTCTTTTCTTTTTTGCGGA 196796 30 100.0 35 .............................. CATCTACATTTAAACAGTGATCTGGTTTGGCCACT 196861 30 100.0 34 .............................. TTGTACTTACTCAGCCATGACCCAGTAGAATAAA 196925 30 83.3 0 ....................ACC...TT.. | ========== ====== ====== ====== ============================== ===================================== ================== 32 30 99.5 36 GTTGAAGTTTAACATGAGATGTATTTAAAT # Left flank : TACGCGTTAAGAATCATAGGCAGGTCTCCTGACTTACGGATTAACATAAACCGACGCCTTCCCTTTCAGTGGCACTTGCCGGTCACTACCGCTTACAGTGATGGGTTCGCTCAGGACTTTCACCTGATTCCCTATTCTCCCCTTGTGGGGCACCATATCATTCACAGTTATTAACTTGGTTTTATTATAACGGCATTTTTTTCTTTTTGCAAGCGTTATCTGCAATTTTTGATGTACTATAAAAAAACCATTTCAGGAAAAGCCCACTGGGAGTTGCCCTCAGAGGGTTTTGCGCGTATAATTTTATTATGAGAAAACTTTAAGAATTTACCAGGCATATTTTGGGACAGACGAGAAAAAAGAACCGCAGGTAAAGGCTTTAGAGAGAAAACTGGATAAAAATATCATAAACCTTACCCGCCTGGTAAATATGGCGAAAAATGGCTGACTCAAAGGGATAAGAAGGAATTTGTTGTTTTAAGATCGGCTTGTTTGCTATG # Right flank : TTAAACAATATTTTACGAAGCTTTTCAGATTAGATTTTGCGAATGCTCAGCATAGTCTTTCTGGCTGTTGTGATATTAGGGTTCCATGTTTTAGAAAGATTACGAAACAGAGGAAGAGATTGGGCTGGGTTTAAGCATAGTGTCGGATAATGGATAAAAAGATGAGGAGGGAAGTGCATGCTTTCGAGGGAAGCTTTTCTGGAGAAACTGAAAAAAGAAATTGAGGCAGAGAACCATTTGATTGCAGTCGCATCTGGAACAGGACTGACAGCAAAATACGCAATTCAGGGCGGCGCTGATTTTCTTCTGGCCTTGAACTCAGGCATTTTCCGCGGGATGGGGCGAGGTTCTCTCGGCGGGCTTTTACCCTACGCCAACAGCAATGATATGGTCTATGAGTTTGGTGTACGGGAGCTTATTCCGCTGGTAGGCGATTTTCCTGTTATATTTGGCTTAAACGCCACAGACCCTACAAGGGATATGACCGCTTATCTGGATAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGTTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 108079-108893 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUDF01000013.1 Eubacterium sp. AM05-23 AM05-23.Scaf13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 108079 29 100.0 37 ............................. TTAAACGCCGGGAGACGTTTCGGGTTTTCCTTCCATT 108145 29 100.0 38 ............................. TATGGTATGCATTAGATAACGTAACAGTTGCGGATATA 108212 29 100.0 35 ............................. TTAGGTCATTTGTTGGTCTTGCATAAGAATATTTG 108276 29 100.0 39 ............................. TTCGCCTTAACGATCTGTTCTACATTCGCCTCCTAATTA 108344 29 100.0 35 ............................. TCGGCAGATATCACAGACTTTCCCATCCCCCACCG 108408 29 100.0 36 ............................. GGCAGATAATTTTAACTTATCGCTGTGGTAAACACT 108473 29 96.6 35 .......C..................... GCCGTAAAGCCAGGCTAAAGCCTGCTGGATGCTGA 108537 29 96.6 35 .......C..................... GGCTGCGTTCCGAGGTGATTGGTGTCCCAGGCAAT 108601 29 96.6 38 .......C..................... GAGGGGAAACTGAGAAACAGGATACTGGTGTCAAGGAA 108668 29 96.6 37 .......C..................... GAAGTTTTAGCATCCAGCTATCTGACATGGGCAGACG 108734 29 96.6 38 .......C..................... GTTTTGAAACTTTTTCCTAGTGTGGCGTCGGCCATGGT 108801 29 96.6 36 .......C..................... TTGGTACATAGCCCGTTTGGGTGGTCGAGCGGTAGT 108866 28 96.6 0 .......................-..... | ========== ====== ====== ====== ============================= ======================================= ================== 13 29 98.2 37 GTTGAAGTTTAACATGAGATGTATTTAAA # Left flank : TTTATTCCGTTTAATATGGGAGAAAGGCAATGAATACAAATAAAAATTTTAATTATAACTATGCCTTTGTATTTTATGATGTCAATGAAAAGCGTGTGGCAAAAGTTTTTAAAATTTGCAAAAAATATCTTGTGTATTATCAGAAGTCCGTATTTAGAGGCGATATAACCCCATCAAAATTAATTACTCTGAAAAACGAACTGAAAAAAACTATTGTCGAAGATGAAGACTTTATCTGTATTGTAAAACTACTGAATGGAAATGTCTTTGGAGAAGAAGTTATGGGTATCTCCGAATCCTCTGAAGACCTTTTCCTGTAACTCAGTTTTACCAGGCGCAGAAAAAAACAAAATGCCAGAATCCTTTTAAATAAACAGTTTGTGCGCTATCTGAAAGAAAAACTGACAAAAGTTTGTGCAGCTGGTAAATTTATTGATAAATGGCTTAAAATCAAAGGTCTTAGAGAATACGAATAGAGGAAGAATGGCTTGTTTATTATG # Right flank : ATCACAAGGACATCAGAGATAAAAGAGATTGTTAAGAATAAAGACGTATATTTAAATCGGGGTTTACTAGAAATGAAAATATCGAGGCAATATATTCACCGTTCTCAGATAGCATTGAAGAATAATAAAAGCTATATTTATCAACATAAAAACTAAAACCGCCAGCTTACGCTGACGGTATAACAAGCTTTTATTTTTCCTCATCATTTTCTAACAGAGCATCCTCCTGCTCAGCGTAGAGGCTGTCCAGCTCTTCATTAAGCAGTTGGTTTGCAAGAATAACCTCCTTAATTTTCTGGACCAGGCCAGAGGCGGTTAGCAGGCAGGCTGGGATAATGATGAACCAGAGCATGTGGAACATACTGACTTCGCCGCCGGTAAAAAAGGTGTATATCAGCCCGCCAAAGCACCCGAGCATAATGACCACTGTCACGATGAGGGTGGCGTTAAAGGACATATCCATGGTCAGAGCCACGAAAATGCAGAGAACAAAAAGAATC # Questionable array : NO Score: 5.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGTTTAACATGAGATGTATTTAAA # Alternate repeat : GTTGAAGCTTAACATGAGATGTATTTAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //