Array 1 168870-169759 **** Predicted by CRISPRDetect 2.4 *** >NZ_QEKH01000003.1 Victivallis vadensis strain DSM 14823 Ga0215691_103, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 168870 30 100.0 35 .............................. TCCGCGCGGAGGTCAAGCGCATCATCCATGCTGTC 168935 30 100.0 36 .............................. CATTCGCGCGCTGCAAGGCAAGCTGGCGCCGGATCG 169001 30 100.0 36 .............................. AAATAGGCCATCTTCAGCACGTCGAACGCATCGTGA 169067 30 100.0 36 .............................. CTTCAATATTCAGATCCGCGGGCTTGTCGAGCGCGG 169133 30 100.0 37 .............................. GTAAATTGTTTGATTCGTTCGGGCCGGAAGGCTGTGT 169200 30 100.0 37 .............................. CCGTTGCAGCAGCGATTGAATATCTCAAGCAGGAGGT 169267 30 100.0 36 .............................. ACTCTTTCAAGAATATTGTTATCGCCGGTAGCGGCG 169333 30 100.0 37 .............................. GTGCTTGTGCGTCAGGCACAATTGGAGCGGCTGCTCC 169400 30 100.0 37 .............................. CATAATGATCCGTTACGCCAATCCGTCGCGCTCATGG 169467 30 100.0 35 .............................. TGGGTATGGGTGATTGAGTTCAAGCAAATCGAGGT 169532 30 100.0 37 .............................. CCCGGTGAAGCTGCTGTTTCGGCAGCCGGATTTACCC 169599 30 100.0 36 .............................. CTGCCCGTATTTGGCTGGAAGTAACCGATGTGAGAA 169665 30 100.0 35 .............................. CGCGAATGCGAGCGTTTAATGGGGTTTCCGGACGA 169730 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 14 30 100.0 36 GTCCCCCTCCAACCGTAGTGGATTAGAAAC # Left flank : GCTCAACCGTTCCGTCTCGTATCGGCAGCTTTTGCGTCTGGATTGCTATAAACTGATCAATTTTCTGCTGGAAGGCCGCGAATACCTTCCGTACCGGATAGGATACTGATATGTATGTGATCATTGTATATGACACGGAACACGACAACTGCGTCAAACTGCACAAGCAGTTGAAGAAGTACCTGTTCTGGAACCAGAATTCAGTCTTTGAAGGTACTGTAACCGTAGCGCAGTACGCAAAGATCAAACATATTCTGGAAGAAACCCGGGCTGAAAATAGTCACATCACATTTTATTCCATTGAAAACGAAAAATTCTTGTGTCGTGAAGAACAAGGTTCAGCCAAAGGGAATATCTCAAATATTCTTTAAGCATTGGCGGAAAGTCTGTTGCACGATTGAATACCGACAGGTGGAAATCCACGAAAAGGTACTCGAGCTGTTTGAAAACTAAATAATTTGACCTCAAAAAGACAGTGTGCTATATTAAAACATCACGGG # Right flank : CAACTGGTGACGCTGTTTGTCCAATTATAGTATGCAACTCGGTTTGCGCGCGGCGTGAAAATTGGTTTGCGCAGTAGTCGGTATTGAGTGTGCAAACCGATTATAAAAAATGGTCGGACTGTGTGGCTATTCGGTTCTTATATATAAGGTATAGGCGAGAGCTATTTGTCAAGTAAAAAAAAGACGGTTTGCGCGGCCGGAGTGCTGCGCAAACCTTTTCTTTTTCCCGGTGGCATTGATAACCCTGCGGCCGGGATCGGCAGGCTAAGGGAGGCGGCAGGCGGCTTCGCTCATAGCCCGGACCTGCCGCGTCAAGCGTCAACGCCGCGCGCTTAGGCGACCGGGCTATTCTACCTTAAAATGACGACGCTCTTTAAATTCCTCTTTCTTCCCTTTGTTCCAGTTGCTCACCGGGCGGAAGTAGCCGCAGACGCGACTGTAAACTTCACATTTTTCCCCACATTTACTCATTGGCGGCCTCCTTCGCCTCCCTGTCCCTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCCCTCCAACCGTAGTGGATTAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 2 198851-199482 **** Predicted by CRISPRDetect 2.4 *** >NZ_QEKH01000003.1 Victivallis vadensis strain DSM 14823 Ga0215691_103, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 198851 30 100.0 37 .............................. TGGCAGACTACATCCTCGTATTTGTCGTCTGTAACGA 198918 30 100.0 37 .............................. GAAAGAAGTCGAAACGATGGGGGAGGCGGTTCGGATC 198985 30 100.0 38 .............................. ATCGGGATGATCTGGATCGCCTTTTCCTGTCCGCCCGG 199053 30 100.0 39 .............................. GCTTACGACCGAGGACAAGGCGGAAGGCATCTGGTCCAG 199122 30 93.3 36 TC............................ CAGTGACGAAGGTGCAGGCACGGTCAAGAGTGTGAA 199188 30 96.7 36 ..T........................... TTTGTAAAAAAATACCTGCCGGGTCATGTGGAAATG 199254 30 100.0 37 .............................. TCGCCGTTCGCGCGGAGCCGGTCGCTCTCGATCCCCT 199321 30 96.7 35 ..T........................... GATGGAAAGCGCGCGGTTTACGGCTGGCGGCCGGT 199386 30 93.3 37 ..T........C.................. CAATGAGATGACAGATACTTTTTCGTATCAGAACGTG 199453 30 96.7 0 ..T........................... | ========== ====== ====== ====== ============================== ======================================= ================== 10 30 97.7 37 GTCCCCCTCCAACCGTAGTGGATTAGAAAC # Left flank : CGGTGTCAAGCACCCGGCCATGCACGAGCTGCTCGACATCGTCGACGAGGCGCGTTACTGCCTTGAAGGGCTGGCGGTGCCGCCGCCGATGGTACTGAATACCGCGACCGGCGAAGTTTCCGCCTTGCCGGAGGCGGAGAAGGCTCCCGGCAAACGCCGCGGCCGACCGGCCAAGACCGCCGGGCCGTACAGTGCCGCGAGCAAGAAACAGGAACGTGCCGAGCGCGCCCTGATCGCCGACCTGCAGGAGGTGATCGACCGGGCCGGTTGCACGAACATTCCCGACGCAGTCACCGAGCTCCTGCAATGCGACGTGCAGCCGGGCGTGATTCTCCGTTTGATCGGCTGCACGCTTGAGGAGTTCGCCGCTCTGCGCGACGGCAGGGCCGATGCCGAGCTTGCCGGGAAGTACCTCGCGGTATTCAAGCTCAAAGGCGAAAAGGAGGCGTGACGATGGCGACGATCAACGACAATCGCAAGTACAAAGTGGGATTCCAGGC # Right flank : CTATTCATCGCAAAGTCCGAACTGGTCGTCATGGCCGGTCTCTCTCCAATCGTAAGGGGGGAGACCGGTCATGGCGTTCGGCTTCGTCACTATCGTTCCTCGTTATTTTGCAATTGCAAAAATATTGTGGAAACCGATCGGTGCCTTACCTGTGCCAGTCGCCCGCGCGCCCCCGAAGGGCGTAGAGCGCGCATCCGGCAGCGGCATCTTGCCGCCCGCCGCTTTGCTTGCTCAGCGAAGGGCGGCGAGGGCGAATTCCACCAGATATTCGATGCCGACTTTCAGCGCCTCATCCGGGAAGTCGAACTTCGAGTTATGCAGCGCCGGACAATTCTCCCCGGTTCCGAGTTTCACGTAAACTCCCGGATATCTCTGCAAATAGTAGGCGAAATCCTCCGCCGCCATCGAGGATTCGGGAAGCTCGGTATAACCGGCTTCTCCGAAAGTCCGGCGGATCACCTGCCGGGCCAGCTCGGTGGCTTCGGGGCGGTTCAGGGTGA # Questionable array : NO Score: 3.07 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCCCTCCAACCGTAGTGGATTAGAAAC # Alternate repeat : GTTCCCCTCCAACCGTAGTGGATTAGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //