Array 1 96566-93978 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGSZX010000010.1 Klebsiella pneumoniae strain SCC10 SCC10_c10_length_166935_cov_91.294022, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 96565 29 100.0 32 ............................. CTGCTGACGACGTGGATCCGCTGGAACGTCAC 96504 29 100.0 32 ............................. TACTGGCAACGGAATTCGGTTCGACGTTTATG 96443 29 100.0 32 ............................. CGCTCCCCAGGACAAACGCGGTCTCCGGATCC 96382 29 100.0 32 ............................. TTGCACGCACGTGAATAGTCCAGGCCGCCTGG 96321 29 100.0 32 ............................. TCCAGCGTGTGCATCTCGCCGATCTCTTTTTG 96260 29 100.0 32 ............................. TAGGGTATCCCGTTCTCATCCACGGCAATATG 96199 29 96.6 32 ............................T TGAACTGATCAAGGGGCGGCTTCAGGCAATTG 96138 29 100.0 32 ............................. AGTAACGAAACGGTCGCACTCAACCGCGCCGC 96077 29 100.0 32 ............................. TCTTGTTAGTGATTGAGTAGCCCATCTGGGAC 96016 29 100.0 32 ............................. CTACCCGTAAAAAAACCGCTGCCGCTGTCGCC 95955 29 100.0 32 ............................. CTCTTAATGGAATTCGTGAAGACGCTGGCCTT 95894 29 100.0 32 ............................. ATCTGGCGAGATTTTACGGGAAATAATATCCC 95833 29 100.0 32 ............................. GTTTTGACCGAGTATATCTGGCGGGATACCCC 95772 29 100.0 32 ............................. GTCCTGGCTGACCCGGACGAATTTGTTGTGAT 95711 29 100.0 32 ............................. GCGGTTTGCTATCAGATGAGCCTGTCATCAAA 95650 29 96.6 32 ............................T GCTGCACGATGTGATTGAGAGATGCCGGGAAG 95589 29 100.0 32 ............................. GGTTTATAGAGGCTGAGGTATTCACAATGCGC 95528 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 95467 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 95406 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 95345 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 95284 29 100.0 32 ............................. AGCTGCGTGACGTTGAAAAAGATGGCTGCGGG 95223 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 95162 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 95101 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 95040 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 94979 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 94918 29 100.0 32 ............................. TCTTCGAGTTCAGGCCGGTATCCCACTCGCTC 94857 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 94796 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 94735 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 94674 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 94613 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 94552 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 94491 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 94430 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 94369 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 94308 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 94247 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 94186 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 94125 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 94064 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 94006 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 43 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCTTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCAACACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //