Array 1 973203-974022 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABEKX010000001.1 Lacticaseibacillus absianus strain YH-lac23 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 973203 28 100.0 33 ............................ CGGGTACGGCCAGTGGTTCCAAGAGGACTTCAT 973264 28 100.0 33 ............................ TGGTATGTACATGCCCGAACCATCAACTGCGCA 973325 28 100.0 33 ............................ TGATCCCTGACGAACTAGCCCCGCTGAATGGAC 973386 28 100.0 33 ............................ AAGGTTATGTCGTCGTTTGATGCGATGAGTAGC 973447 28 100.0 33 ............................ CGACCCCCGGGTGAGAGGGCCGCTCTTTTTTAT 973508 28 100.0 33 ............................ CCACGCCCAGCAAGAGGTCTACCTTTACTCTTT 973569 28 100.0 33 ............................ CGAGTCGCCGCTCACCTTCTCGATCAGCCCCAA 973630 28 100.0 33 ............................ CGGGATTGCGGCACCGCGTTCTCAGCGTCGCAA 973691 28 100.0 33 ............................ CATGGCGATGATCGACATGAGTGACAACGCGAA 973752 28 100.0 33 ............................ CGCCAGCGCCAGCAGGCAAGACGGTCGCTCAGC 973813 28 100.0 33 ............................ CCTCTCCCTCTCCCCGATTGTGGAAGGCAAGGT 973874 28 89.3 33 ........T............A....T. TCAGGTGGACTATAGATTCTTCATCGGCTTTAA 973935 28 85.7 33 ..A.........C.T......A...... CCAGTTAAACAGGTTTTGTCCGAAATTCATAAT 973996 27 78.6 0 ..A...........A..A...A..-C.. | ========== ====== ====== ====== ============================ ================================= ================== 14 28 96.7 33 GTGTTCCCCGCGTAGGCGGGGGTGATCC # Left flank : CAATAAAAATATTGATTATGGGGACGAGAGGCCGGCTGGTTGAAGCTGCCACTAGATTCGATTGGCAAGCGCTATTATTGGTAGGTGCGCACCTCTATGTGCACTCGTGATTTTCGATTATGCGATGTGGTGATTTAGATAGTTGTTCGCATGTTCTAAAGTTAAGTCGTTGCAAGGCGTCGTTGACGTGTTGTCGCCTAAGTCGCTATCAATGTATTTCTTGCGAACTTGCCACAGATTTTCGACCGTTGGGTTTGACTGAGTCTTGGAAACGACTCATTGAGACTGGTTAATTCATCGAGCGATGATTGGTGAGATAGAGATTCACATGCGGTAACGCTTGTTTCAGTGACTGTTCTGGTGGGGGTTGATTTGGACAAAACTGAAAGTTGAAGATATTGAGTGTTCAGCGTAGCATGATGGTAGGATCATCAATCGAAAGTCATTGAAAAGCTCCGTATATTTTTCTTAGAAGCGCGATATTTCAGGGATTGTTTAGT # Right flank : CACCACGTGATCTACGTTCACTTCGTTGGGATCGGCGCGGATCCTCCCGCAATTGAATGGGCAATGTGCTTGGCTACGGTATGCCCGCACGGTGAGGTTCTGCTGGACTTGATCAACCTTTGCGCAGAATCTCGCGCGGAAAGTTACTGCGATCGAATGGTTCAGGGCTTGTTCACTCGATAAGACTGTTTTTGCCAAGTTGGCAAGAGCGAGATACGCATTAATTAATACAATAAATAATCTGAATTTTCACAACTTTATTGATATTGAAAATTATTCGACAAGTTGGAAGATGAGTGATAGTTTATTGGTATACTAGGTTAATAGGATGATGGTGGAGAACGGATCGACTTGATATAGATGGTTCCCTACGGAGGCTGTTCAAAACTTACCTACGAACAAACTGCAGGACATCTGTGCGCAAACACAATGGCTGACGATGGGTGCTGACTAGATGATCTGGCTCGCGTCCAATCAGGCGGGGTGTGCTCAAGTCGGGT # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTAGGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 984090-985218 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABEKX010000001.1 Lacticaseibacillus absianus strain YH-lac23 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 984090 29 96.6 32 ............................T CTGACTGCCATCTAGTCAGGCCTCCGGTGCGC 984151 29 96.6 32 ............................T TTCTCGCCGGCCGCGCTGCCAAGATGAAGCTC 984212 29 96.6 32 ............................T CAGGCCGCCAGCCTTTGCGGCCCGTACAGCCT 984273 29 96.6 32 ............................A TCACCACGAGGTTGGCCCAGGGGTACTTTAGC 984334 29 100.0 32 ............................. TAGTCGCAGACAACGTGGCATCCTTTACCGAG 984395 29 100.0 32 ............................. GACGTGATCGTTTTATCCAACTCCAAAGAGCA 984456 29 100.0 32 ............................. TTTCACCCCGATTTTGAGCCGGGACATGACGC 984517 29 96.6 32 ............................T ACGCCGCGGCGCTGGATGGTTGACCTCGCCAA 984578 29 100.0 32 ............................. CCGAGCAACTCGACGCTGTCAGCGGGTGATGT 984639 29 100.0 32 ............................. CCGCGAAAACCCTCCCCAGGGCAACGCAGAGT 984700 29 96.6 32 ............................T TGATTCTGAGGCCTGCTCGCCACCACGCTTGA 984761 29 100.0 32 ............................. GTTGCGATGTTGCTTGTTCAAACGCTGAATAC 984822 29 96.6 32 ............................T GAAGAGGTCGCTCAGACTTTCAACTCTCCGAC 984883 29 100.0 32 ............................. AGTTTAGTGCGACTAGTGTATATACGGCTTGC 984944 29 100.0 32 ............................. AGCCCATCGGCGTGCTTTTCAGCGGTTCCGGT 985005 29 96.6 32 ............................A AACGAGCAAGCGGCACAAGCCAAGAGGCCGAA 985066 29 96.6 32 ............................A AAGTACGGGGTGCCGATCACGCTCGACGACAG 985127 29 89.7 33 ...................T.G......T CCGTTTGGTGCGGAGATTTCAGTTGCGGTGTCT 985189 29 82.8 0 ..T..T..A......A...........G. | G [985206] ========== ====== ====== ====== ============================= ================================= ================== 19 29 96.9 32 GTATTCCCCGCGGATGCGGGGATGATCCC # Left flank : ACCGGTTTGTCACACGATCAGTTGGTCAAAAGCGGGCGCCCCCTGGCGGCGGTCCTCGCTGAGCTGAGTGACTTTGTTGGCCTGCTGCCCGTCATCGGGTACAACCTGCGTTTCGATGAGGCATTCTTGTTGAACGCCTTGCAGCGGGTCGGGCAGGCACGCTGGCCGAATAAGATGATCGATGTGAAGCCAAACGTGATGAAGGCCGAGCCATTCCTGGACAACTTTAAACTGAGCACGGTCTTAAAGCAGTATGGAGGAGTCAACGAGCAGCCACATCAGGCGCTGAGCGATGCGCGAGCGACGCTGCGATTGGCGGACAAGCTGATCGAGGGTGGCGCACTGAAACTTTAGTCTGCGATGACGCGGATGAGTAAGTGGTGACGAGGGGTCCCTCGAGAGGGGCTCTTCGGTTTCTAACCGATCAATCGGTCGCGCAAAGTGATTGAAACTCGGGGTGTGTGAGTTTGCAAAGTGCGGTAGCTCAGGGATCGTTTAGT # Right flank : CCGATATGCTAAAGTCGGCGTTTCCCTAGGATGCAACTATTAACTCTCTAGACGCTACGGAACGTGTTGACCTAGATCAACGTCAGGAGCAGGATCAACTCACAGCGAAAGCAGGCTTTGCCGGTCAGTGGTCTATGTCTTTAGATCGAGCGGGATAATATTTGGATACTAGGCCAGTTCGTTGGGCAGGAGCAACTGATCACTGAATACGAAATGTGATCAATGCCTGGTCGTCAGGTCCATGAGATACCTGATGTTCAGCGTTGCATCGCGATTGCTAACTGACTAGACAAGCGCCATGCTCCCCAACCTGTCGCCCAGCCAGCCGCTCACTATAGGCGCGACCAAAGACACGTGCCCGCAGTCGATCACCTAGTGACCGACCGTGGGCACGCCTTTTTGGTGTCATTGACCACGTGCAGGCGCGAACGCAAAAGCGCGGACGGGTAGTCGGGCTTGTAACGCGGGTCGGACCGGCATTTTAGTCGGTGAATTTCCCG # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.64, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGGATGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTCCCCCGCGGATGCGGGGATGATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //