Array 1 46003-46364 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDLA01000016.1 Geobacillus sp. BMUD NODE_16_length_58726_cov_12.3414, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 46003 30 100.0 35 .............................. ACGACTAAACTGAATCAGACGCGCGACATGATTTT 46068 30 100.0 36 .............................. GTCGGGAAGACCGGTGCTGGCTTTTTGATGGAAAAC 46134 30 100.0 36 .............................. CTTCCCTGTTTATACGGGGCTTCTTACCCCCGAACA 46200 30 96.7 36 .....................A........ TTCGTCTCCGCCGCTTTATTGGTGTATTCAACCATG 46266 30 100.0 38 .............................. TTTTGCGGAAAATTTTTCGTTTCAAATCAGGGTATTCG 46334 30 83.3 0 ...................C.A...TCT.. | C [46362] ========== ====== ====== ====== ============================== ====================================== ================== 6 30 96.7 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AACCCATCGGTTCACTTGCCTGCGGAGCGGCTCGCCAAACTCGCCTCCGTAGCGTCAGTGCCGCTGCAGTCAGTGAAAGAAGCGATGGCGAAAACGGAAAAAGCGGGATACCAAGAGGCGATCATCGGCCGACTGCTTCGAGACATAAAAAGTTAGCACTCGCCCTTGTTCATGCAAGTGTTGGGATTCCAATGTTTGTATTCGTCTTGCCTGCGATGGATGAGCAGGCGGTGCCCGGGTCTTATTCACCGCACGACGAGCGTTTGTCCTCGCTTAGGCAAACAGCAATCGGCAAACAAGGCAAGTCAAACGCCAGGAAGCAGTCTTCATTTGTCGTCGACCTCCAATCACGCAAAAACCCCAGGGGGTCGACGACAGTGGTTTTGATCGCTTGATCCCTACAGCCATCAAGGATAGACTTGATTGACAGAATCTTCGAAACGTGTTATTCTGATGATGACGTTGAAGGGAAAAGGTTGATATGACAACACTTTTTTGGG # Right flank : CTGTGAGCAGGATGCCGCCTTGAGGACGGCGAATAGAAAAAGGGAGACCGTCAAGGTGAGGTGATTGAATGGCGATTGACCATGATCGGCTGTTCAAAGAGCTGATCCGCACGTTTTTCGAAGAGTTTCTGCTCCTCTTTTTCCCCGACATGCACGAGCACATCGATTTCCACCATCTGTCCTTTTTATCCGAAGAGCTGTTTACCGATGTGACGGCCGGTGAAAAGTACCGCGTCGATCTGCTGGTCGAGACGAAGCTGAAAGGCGAAGACGGGCTGATCATCGTGCACGTGGAAACGCAAGGGTATGTCCAGCCATCGTTTGCCGAGCGCATGTTCCTCTATTTCAGCCGCTTGTATGAAACCTACCGGACCCGCATCGTCCCGATCGCCGTCTTCCACTATGATTCCTTTCGCGAGGAGCCGTCTGTGTTTTCGATGGAATTTCCGTTTGGGGAAGTGCTGCAGTTTCGCTTTTTTCCGGTGGCGCTGCGGAAGAAG # Questionable array : NO Score: 9.10 # Score Detail : 1:0, 2:3, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 56252-57741 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDLA01000016.1 Geobacillus sp. BMUD NODE_16_length_58726_cov_12.3414, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 56252 30 100.0 38 .............................. TCGACAATCACACCGATTTCGCCACGGTAACCAGCATC 56320 30 100.0 38 .............................. TGGAGAATTTGAAGCTGGAGAATATGAAAATTTCCCCT 56388 30 100.0 34 .............................. ATGGCATCCTTGCATATGATGACACCCCCGGCGT 56452 30 100.0 36 .............................. TCACACCGCCCTTCCCGGCCCAAAAGACTACGGGTC 56518 30 100.0 35 .............................. ACGAATTGGAGGCGATTTTACATGGGTAAAGCCGA 56583 30 100.0 36 .............................. TGAAGCCGAATTTTTCGCCGGCCAGCCGCCCGTTTA 56649 30 100.0 35 .............................. CGGCGACGTACGCGCAAACTACACTGATGAAATCA 56714 30 100.0 35 .............................. GCAGTAATGAGGACAAAGGAACGTTAAGTGAAAAG 56779 30 100.0 35 .............................. TTCGATTTCAGCACCAGGAAACCCGCGGCACGGCC 56844 30 100.0 37 .............................. CGGCTTGTTCCGGGTGTGGAGGATACGTCCCCACATC 56911 30 100.0 36 .............................. TCGGTACGTAACGTTTTATAACTCAACATACTATCA 56977 30 100.0 35 .............................. CAAAGCTGACAAAAAAGAACGTGTGGAATCATTCG 57042 30 100.0 36 .............................. AGGTGCGGACGTACCGAACAAAGTTCGTGACAGGTT 57108 30 100.0 38 .............................. GTCTCCTCGGCTCCGCTACCCACCGGACTAGGCTAGCC 57176 30 100.0 34 .............................. TTCACAAAAATTCACTAATTTGAATAGATTCCAC 57240 30 100.0 35 .............................. GCTGACCGCATTGAGACAATCATCACATACAACCT 57305 30 100.0 39 .............................. CCCAAATGCGGGCGCCTTCAGCCCCCTTTGGAAATGGGA 57374 30 100.0 38 .............................. TTGAAATTCATGAATCCAATGTTGCGTTCCTGATTTAT 57442 30 100.0 37 .............................. CATTGAGGTGAACCATGAAACCAAGCATTCATTTTCG 57509 30 100.0 36 .............................. CATTGCATGAGCACTTCAAAAGACTCGAGGAAATAT 57575 30 100.0 39 .............................. AGAAAATGGAGATATACGGCGACATATTGGAACTGATCG 57644 30 93.3 38 ................C........A.... ATAACTCAAACTCCAAGCTGCCTTCTTTGGCTTTGGCG 57712 30 80.0 0 ............A....A.C.A..GA.... | ========== ====== ====== ====== ============================== ======================================= ================== 23 30 98.8 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TATGAAACGATCGATGGCAAAAAGAAAACGCATTTTTTCGGGCCGGACGACGACGTCTTTCCCCACCTCGTGGAGCTGAATTTCCGCCATAAATACGAAGCGTACTATGGCGTCGAGCCAGAAGAGAGATTGATGATCGAGCCTGTCCATGTCCACCACCGTCATCGAGTGGTAACAAGATTCAAAGATATGTATATTACGGGCTGGTTAGGCCATTATCGTCTTTCCTCTTCTCCCGAACAACTGACGTTTCTATACCACGTTGGCCTAGGCAGCCGCAATTCCCAAGGATTCGGCATGTTTCGGTTAATCAGCGAGTGAGCCATTCTGATTGTCGTCGACCTCCAATCGTGCAAAAACCCCAGGGGGTCGACGACATTGGTTTTGATCGCTTGATCCCTACAGCCATCAAGGATAGATTTCATTGACAGAATCTTCGAAACGTGTTATTCTGAGGATGACGTTGAAGGGAAAAGGTTGATATGACAACACTTTTTGGA # Right flank : CCGACACCTACGTTTGCTCACCCAACCGGTCTCTTTGTAAACATTTGTGATGAAAAGAACGGAACTCCCCTTGTTGTGCATCACGGTTTTATAAATTTTTGGTTTTTCTATTTTAAGGTTAGAGAGCTAACCACCGCGACAGGAGGCTTCGCATCGATGCGCCAAAAACTTCGCAATCTCGGGTTTTCGATCGGCACGCTTCCGACAGGGAAGCGGAATCAAATTACGGATGTGTCCGGCGTTCGGGTCGGGCATGTGACGGTTCGTGAAGAGCGGGATGAACGGACGGTGATCCGCACTGGGGTGACGGCGGTGTTGCCGCATGGGGGGAATTGGTTTTTAGAGAAGGTGCCGGCGGCGTGCTTTGTCCTGAACGGGTTCGGGAAAACGGCGGGGCTCGTGCAAGTCGAGGAGCTGGGGACGATCGAGTCGCCGATTATGCTGACGAGTACGTTCAGTGTCGGCGCTGTCTGGCAAGGGACGCTTGAGTATATGATGGA # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 511657-511986 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDLA01000001.1 Geobacillus sp. BMUD NODE_1_length_765875_cov_11.1425, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 511657 36 100.0 38 .................................... AAATTTTCGTTTCTTTCTTGAATGAGCGCAATAACGTC 511731 36 100.0 37 .................................... AACAGAACGCGTAGATGTTTCTGTTCACTTGATCGAT 511804 36 100.0 36 .................................... TTGCATGTACCCTGATTTCAGATATTTTTCCTTATC 511876 36 100.0 39 .................................... AGTGGGGTGGATGCCGCGATCTTCCGCCCAGACCATCCA 511951 36 97.2 0 .................C.................. | ========== ====== ====== ====== ==================================== ======================================= ================== 5 36 99.4 38 CTTGAAAGAGGAAGGCCTCGTTTAGAGGATTGAAAC # Left flank : GTGTCGCTTTGCTGGAAAGCGAATTGTTCAGCTATATGGACGGATTTCCCCATGCGAAAAATGGTAGGTCTTGAGCGCTACGCTTCGCAGCACGGGGAAGCCCAAACGTTCGTTGTTGACGGTGCTGTCTTGCACATGTATCGAGCCGGTTGCCGTGTGTTCGATCAGGTGGCTTCCCGCAGTCGGTAAGGAAAAGAGAATAGCGCTGCCGCTGACTGTTTCGGCTGCCATGCCGCCTTCCCCGCCCGACCAGTTCGGTTCGTTCCCGCGCATTTTGCGCGGTGCACGGTCCAAAAACGGCGAAAAAAGGGGAGGTGTGCATGGCGGTTTTTCTTTCGTGAAACGAAACATGACCTTGATTTATCAAAAGTTTGGACAGTTGACGTTTTTGGTCAATCATACAAGTTGACATAACCACATTTTATTTTTCGAGGGGTTGGAAGGGGTGTGCAAAATGGCCCCTTGCTGCCTTAGAAAATCAATGGTAAAATGAAGGTGCT # Right flank : CAAACATTTTAGTGCCCGATTAGCGGTTTCTCTCGCCTTGTAAGAGAATCGTTTCACATGGACATGGAGAATGGTATTCCCCGCTTCCGTTTCGCAGGAGGCGGGGTTGTTTTTCGGCTAGAAATGGATGCAGGAAAACCGTTTGCCATGGCGAAATAATGGAAACACGAGCACTTTTTCGCGGATAAGAAACGCCGCAGGCAAGGCGGCGTGGGGGAGGGGGCGTGCGATGGCAAACGGCAGCAGGAAAGCAAAAGGAGCAGCGAGGGCGCGGCTTGAGCTGGTTAAAGAGCTTTTTCCGGAGGCGGTGGCGGGCGAAGCGATCGACTGGGAGCGGCTGAAAAAGGCGCTTGGCTGCCAGGCGGAGGACGAAGTGTACGGGTTTACATGGCCGGGAAAAGCGGAGGCGAAGCGGTTGGCGGAGGCGCCCGTTGCGGGGGTGCTGCAGCCGGACCGGGAGAAAAGCAAGAGGTGGGAGACGACAAGCAATTGGTACATTG # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAAAGAGGAAGGCCTCGTTTAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 14891-15452 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDLA01000025.1 Geobacillus sp. BMUD NODE_25_length_22695_cov_12.7257, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 14891 30 100.0 35 .............................. TTTCATCCCACTATCTTGGGATAATAACGGCATCG 14956 30 100.0 38 .............................. TCGCCCGTGTTCCAGCAAAGCGAGCCGTCGTCGTTTTG 15024 30 100.0 35 .............................. CAAAAAGACAAGCCATGCGGTGGCGAAGCGAGGTC 15089 30 100.0 37 .............................. AGCGTTACCGGTTGAGCATAGGTTTCTCCGTATCTTT 15156 30 100.0 37 .............................. TACTTCTGGAGCGCGACGACAGGAACGGGGAAAACGA 15223 30 100.0 39 .............................. TTATTCAGTACGTCCAATCGTGCAAGTCGTGATGTCTTT 15292 30 100.0 35 .............................. CTTCGCCACCGGACCAAGCTGGAGAAATTCCGCCC 15357 30 96.7 36 ....................A......... CCCAATAGACCAACTTTAATCTGCTTGCCACCTAAT 15423 30 90.0 0 .....................A..G..G.. | ========== ====== ====== ====== ============================== ======================================= ================== 9 30 98.5 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AACGATCGAAGTCCAGCCGGTCGACATGTTTCCCCATACGGCGCATGTGGAGTGCGTGGCGAAATTGCAATGGCGGATGTAAACGCCAAAGAACCAATCTTGATTGAACGTCATGTCCAAAAGAAGTGTCCCGTCTCAAGAAATGGGCAGTCCGACCGCCCGCTGAGCAGGCGAGCGAGGAAGGCCGTTAGCCATCATCAAAGAATTGGGGTAGTGGTGGTGAGAATGGATACCTTCGGAACAAAGGGAAGCAGAAAGAGCTGATGGCGCACGCGCCCCAATCGCTTGAAGCCCCTTCTCCAAGCGAAGCGCAAATGGCCGATCCGTTCACTTGTCGTCGACCTCCAATCGTGCAAAAACCCTAGGGGGTCGACGACATTGATTTTGGTCGCTTGATCCCTACAGCCATGACGGATGAACTTGATTGACAGAATCTTCGAAACGTGTTATTCTAAGGATGACGTTTAAGGGAAAAGCTTGATATGACAACACTTTTTGAG # Right flank : CAACTGTTACACCTACAGCTGTCCATAGCATACCCTTGTGTTGCTTCCACTGATCTCCCCATTCAACCGCTTATGTTTTTGGCCGTTTTGGTTGCTTTTCTCCTTCATTTAGCCAACTAGAAGGATGGAGTCGAGCGCATGTTCCTCTATTTCAGCCGTTTATAAGAAACTTGGCGCATCCGTAACGTTTTGCTCCTGTTTTCCGCGGTGATTCCTTTGTGATTGTACCCATCGATGTTCTATAGGAAAGGGGAAATATGATTCAGAAAATATAGAAAAAAACTATTATAAAAAATTATTGAAATAGAAATATGTGATTATTTATAATATAGCTTAGCCGTGTGTTATACAACAAAAGCAACTGAATCAATGAGGAGGGATGAATTTGATTGACAAGCTTGTCCAGACGGTGAATGAGTTATTATGGAGCCCTCTCTTAATTCTTTTTATTGTTTTTTGTGGAGTGTATTTTAGTATTCGCACCCGGTTTTTGCAGATTC # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 171746-172439 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDLA01000003.1 Geobacillus sp. BMUD NODE_3_length_225440_cov_11.4683, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 171746 30 100.0 37 .............................. TCTAAGGAGGCAACAATAAAAAAATAAATATAAACAG 171813 30 100.0 35 .............................. ACGAATGGCAATATGACTGACTTTCAAGACCGCCA 171878 30 100.0 35 .............................. AAACGAGATATGAAGCCTATGCGATTGGTATACAG 171943 30 100.0 36 .............................. CTCAAGAAGAGCTAGCAAAGGCCGTTGGAACAACCC 172009 30 100.0 36 .............................. CCATAAGCCGTTGTCAGTGGATTGTGAATCATCATC 172075 30 100.0 38 .............................. GGAAAGTGGATTTACATTCCTCCCGATGAAAAAGAAGA 172143 30 100.0 36 .............................. GGGTTTTCCGAAATAGACATTTAGATTTTTTCAAGG 172209 30 100.0 37 .............................. ATAAGCACAAAAATTTATCATCAACTTGCTTCAATTG 172276 30 100.0 39 .............................. GAAGTTCCGCTATGTACTTCTACACCTCCTCTTCCAACA 172345 30 100.0 36 .............................. TAAATTTCCTCGTACTGATCGGGATCGACAATTTCT 172411 29 90.0 0 ....................A..-....C. | ========== ====== ====== ====== ============================== ======================================= ================== 11 30 99.1 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TTTCCGATGATATCGTCCGCGTCGCCCGTTCACCGATCCGCAAGCTCGGGCCGAACGACCGGCTCATCGCCCCGGCTGTGCGATATTACACCTTATTCGAAAACGTCCCGTCCGGGCTTGTCAAAGGCATCGCCGCGCTCTTGCGGTTTGATGAGCCTAGCGATGCCGAAGCTGCTGCTCTCCAGCAAACGATTGAACAAAGCGGTGTCGAAGGGGCGCTTCGGCAATACGCGGGACTGGAGCATGACCATCCGCTCGTCGTGGCGGTGAAGGAAGAATATGCTCAAATGAAACAAATGGATTCGCGTTAAACTCGGAAATCCTCTTATATTCTGTCGTCGACCTCCAATCGCGCAAAAACCCCCGGGGGTCGACGACAACCGTTGAAAGCGCCCGAACCTTCCAGCTATCGAAGGAAAAAGAAATTGACACAATTTTTGAAACATGCTATTCTGAAAGCAGCTGCCAAGGGAAACGCCTGATTTCACGGGCTTTGTTTG # Right flank : CAAGAGAAGGCCGTCTATGTGGCGGTCTTCTTCTTTTGTTTTGAAAGATGGGAGCCATTGTCCTCCGCGATGAAAGAAATGAAGTTGGGTGAAGGATGCTTACAGCGGGGCAACCTTGTGAACAAAATGCACAAAATTCATTTTATTTTCAAAAACTTCACGCCGATTTGGCGGCGTGGTAACGTTATGAATGAAAACGTTATCAAATAAAACAAGGGGGCAAGGGAGAATGAAGAAAAAAAGATGGTGGGGATTGTTCGCCGCTGGGATGATGACAGTGGCCTTGGCGGCCTGTGGCGGCAATGAATCGGCAGGATCGAAATCATCCGGTTCGAACGCTGGCTCATCGGCCTCAGACTATCCGACGAAGCCGATCACTATTGTCGCTCCGTCCGGGGCGGGCGGTGGTTGGGATTTAACGGCCCGCGCGATTACGAAAGTGCTCGATGAGGCGGGGCTTGTCAAACAGACCATGACGGTTGAAAACAAACCGGGCGGCG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //