Array 1 206072-208721 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKHD01000003.1 Klebsiella pneumoniae strain EuSCAPE_PL056, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 206072 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 206133 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 206194 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 206255 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 206317 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 206378 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 206439 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 206500 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 206561 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 206622 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 206683 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 206744 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 206805 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 206866 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 206927 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 206988 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 207049 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 207110 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 207171 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 207232 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 207293 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 207354 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 207415 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 207476 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 207537 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 207598 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 207659 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 207720 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 207781 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 207842 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 207903 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 207964 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 208025 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 208086 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 208147 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 208208 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 208269 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 208330 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 208391 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 208452 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 208513 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 208574 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 208635 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 208693 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //