Array 1 3481224-3479368 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025630.1 Klebsiella pneumoniae strain LS359 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3481223 29 100.0 32 ............................. TTCTTCCAGAGTTGATTTGGCATCACACAAAC 3481162 29 100.0 32 ............................. GACCGTGCCAGTGGTACCGCCCAGAAGTAGCA 3481101 29 100.0 32 ............................. GTGACGAATTTCGTTAACCTGCCGGCCAGCGT 3481040 29 100.0 32 ............................. AAAGATTTAAGTAGCGCCGGTAAAACCGGATT 3480979 29 100.0 32 ............................. CTCATCACCACGATATTGCGCCCGGTCACGAA 3480918 29 100.0 32 ............................. TCGCAGCCGACCAGTACCCATTCCGGATCATC 3480857 29 100.0 32 ............................. GAGCGTCCGGATGTGCGTTACCGCCGTATCAA 3480796 29 100.0 32 ............................. TGAGAACGGCGAGTGGGAAACGTTCATGCTGC 3480735 29 100.0 32 ............................. CATGCCGCGGGGTGGCTGCTGAATACGTTCGA 3480674 29 100.0 32 ............................. GTCAGGGGATTACCATCCCTGACTTTGTACTC 3480613 29 100.0 32 ............................. TGGATTGACGATCGGGCGCAGGAAATTATCGA 3480552 29 100.0 32 ............................. CCTTCAGCGCCACATTCTCCGCCGCCAGCTGC 3480491 29 100.0 32 ............................. GCGTGCAAAATCAACGTCGCGGCTGTGGTTTC 3480430 29 100.0 32 ............................. GTCTGGATATTTGGGGGCGTATCGTTAATGTT 3480369 29 100.0 32 ............................. TCTTAACGATATTGCGGAGGGAACCGGAATTG 3480308 29 100.0 32 ............................. TTGAGCCCGCTATCTTCACCGATTGCGGCGTC 3480247 29 100.0 32 ............................. CAGGCGGAACCGGTGATAGATTTCGCGGGTTA 3480186 29 100.0 32 ............................. TCGGGGCGGCTCCGGCGATACGTACATCACCA 3480125 29 100.0 32 ............................. GCATACGCGCCCGGCTTTTTGGCTTCGAGATC 3480064 29 100.0 32 ............................. ATATTGGTGGGGATGAGATTCGCGAACTGGCC 3480003 29 100.0 32 ............................. AAAAGTTAGACGTCGCATCAATGAGCGCTGCC 3479942 29 100.0 32 ............................. GGCTGGCTCGTTCTCGACCGTCGCGCAGTTAA 3479881 29 100.0 32 ............................. CCGTCTTCGTTGAGCCAGGTTTCCGATGCGAT 3479820 29 100.0 32 ............................. GGTGAATGGTTTAAAAAGAATAGCCAGGGCAA 3479759 29 100.0 32 ............................. TGGTAGCCAGAGAGCAGCCTGAACACCTGCGC 3479698 29 100.0 32 ............................. TCCTGCAGATCGGAGACGGCGACAACATCGAG 3479637 29 100.0 32 ............................. TCCTGCAGATCGGAGACGGCGACAACATCGAG 3479576 29 100.0 32 ............................. AGTACCGAGATGGCGATACACATCTTTTCTAT 3479515 29 100.0 32 ............................. CTACCGCACAGCGGAATCATTCGGCTTGGTTC 3479454 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 3479396 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 31 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CATCACCGCCATTAAAAGCTGATCGAGAGTACCGACACCAACTTCAGCGAGTAGCGCTTTTTTGCGGGAATCAGCGAACCAGATGTGGCATTCACTGGCGGCGTTGCGATCGTCTTGCGCGTAATCTTCTGCCGTCTCATTGACTGGCTGCCAGATGGATTGCCGGAAAGTTTCTGACATTTCTCTTTCGCCATGAGCCAGTATAAGCGACGGCCTGGCATCATCGGCGAACAGGGCACGGTAAGCCGCCGACAAGCGTTTATACATAGCATTCGCGGTTGCCATGGTCGGCAGTCCAACGTAAAGTCCATGGCCTTTACCTGCAGACATTAAACGATGAGTCAGAATCAGTGCTGCTTCTGTTTTACCAGCTCCGGTTACGTCTTCCAGAATAATGAGTTGCGGGCCTGGCGATGAGATATCCAGAGTATTAGCTCGCTGCTGGAGCGGAGTGAGCGTATGGATAAAGGGAAACAGAGCTTGATGATTATGATAAAAGC # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCTTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //