Array 1 201466-205393 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJXV01000002.1 Klebsiella pneumoniae strain EuSCAPE_TR265, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 201466 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 201525 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 201586 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 201647 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 201708 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 201769 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 201830 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 201891 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 201952 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 202013 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 202074 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 202135 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 202196 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 202257 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 202318 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 202379 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 202440 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 202501 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 202562 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 202623 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 202684 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 202745 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 202806 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 202867 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 202928 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 202989 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 203050 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 203111 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 203172 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 203233 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 203294 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 203355 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 203416 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 203477 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 203538 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 203599 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 203660 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 203721 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 203782 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 203843 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 203904 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 203965 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 204026 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 204087 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 204148 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 204209 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 204270 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 204331 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 204392 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 204453 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 204514 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 204575 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 204636 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 204697 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 204758 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 204819 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 204880 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 204941 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 205002 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 205063 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 205124 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 205185 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 205246 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 205307 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 205365 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //