Array 1 56948-60631 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGYBS010000015.1 Klebsiella pneumoniae strain MRSN702325 MRSN702325_contig00015, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 56948 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 57007 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 57068 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 57129 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 57190 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 57251 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 57312 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 57373 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 57434 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 57495 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 57556 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 57617 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 57678 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 57739 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 57800 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 57861 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 57922 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 57983 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 58044 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 58105 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 58166 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 58227 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 58288 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 58349 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 58410 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 58471 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 58532 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 58593 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 58654 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 58715 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 58776 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 58837 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 58898 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 58959 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 59020 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 59081 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 59142 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 59203 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 59264 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 59325 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 59386 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 59447 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 59508 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 59569 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 59630 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 59691 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 59752 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 59813 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 59874 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 59935 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 59996 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 60057 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 60118 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 60179 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 60240 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 60301 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 60362 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 60423 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 60484 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 60545 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 60603 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 61 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTATCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //