Array 1 109063-104195 **** Predicted by CRISPRDetect 2.4 *** >NZ_RKLS01000008.1 Halomicroarcula salinisoli strain F28 NODE_8_length_149867_cov_28.167838, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 109062 30 100.0 35 .............................. CGACGGTCGCGGAACGGCGACGCGCCATGCCACTC 108997 30 100.0 35 .............................. GGCAAACCCGGACGGATACCCCGTCCCGGCATCGG 108932 30 100.0 36 .............................. AAGAGTAGCCACGGCCTATGGCTGTGTATGAGCAAG 108866 30 100.0 36 .............................. CGTCCGTGGGTTTGGGTGCAGTATGGCAACCAGCAG 108800 30 100.0 34 .............................. GGCCCGGACGACGTAGTGTTAAAGTACGCTCCGC 108736 30 100.0 35 .............................. GTGGTAAATATTGTCGAACCACCAATCAGCCACCT 108671 30 100.0 36 .............................. CCATTATGGCGTCGTCACGAACCGCCGAACCCGCTG 108605 30 100.0 37 .............................. GTCCGGGCCGTCGCTGCGCTCGGTGTGGTTGTCGCGT 108538 30 100.0 35 .............................. TCGGGATTTGACAGCGGAACACCGTTGCTATCAGG 108473 30 100.0 35 .............................. ATCCCCAAGACGTTCGCGCCCGACGTGACCCACGA 108408 30 100.0 36 .............................. ACCGACAACGGAGACGGGACATGGAGCGCAGATATC 108342 30 100.0 34 .............................. CGGCACACTCCTCAACGGTGACGAGGCGGTACGT 108278 30 100.0 35 .............................. GACGCCACCCACCTGCGGGTCATCGGCGCGCACGA 108213 30 100.0 37 .............................. CTCCTCGGCGCGAGCTCGAACCCGAGAGCGGTACTCG 108146 30 100.0 34 .............................. CGTGAGGAGGAAGCGGTGGCGCGGGCGCTGTCGT 108082 30 100.0 36 .............................. TGGGAACGGAAGTCCCGGCCGAAGCCCGCCGACACG 108016 30 100.0 36 .............................. TTGTGAGAGATTGCGGAGTTTGATGGGGTCGAAGTC 107950 30 100.0 36 .............................. TTGCGGTGTTTTCGACTTACCAGATACATCATAGCC 107884 30 100.0 37 .............................. GCTCGGTCTACCGCAACCGCAGCGGCTAGCGCAAAAA 107817 30 100.0 36 .............................. TCATTTTGAACGCGCACAAAGCGGTGCTGGTCACAG 107751 30 100.0 34 .............................. GCCGCGTCGTCGAGTGCCACCGTGTAGTTCGGCA 107687 30 100.0 34 .............................. ATATGATGACTGGATGGAGAAAACTACTCAGACT 107623 30 100.0 35 .............................. TTGCTCGTCTTCTGGATGATGTAGCCGACCCGCCA 107558 30 100.0 37 .............................. GGCCTCTCGGCAAGCGTCGGGGGATACCGCACGGAAG 107491 30 100.0 36 .............................. AACCGTCTCGCCCGCCTCTCGGTGGTAGTAGTGAAA 107425 30 100.0 37 .............................. GATAACACTGGCGACGTTCTCCAGGTCCTCCAGCGCG 107358 30 100.0 36 .............................. GGGACTTGGTGATGGGCGGCCACGTGCAGAAAGTGG 107292 30 100.0 36 .............................. AGCCCATATCTGTCTGGGAGATGGGATGTTTATTTG 107226 30 100.0 34 .............................. CCCCAGCCGGACACGGCCGCTATCAGTTCACGAC 107162 30 100.0 35 .............................. CGTCGAGGATCGCTACGCGACCGCGGGGGTCGCGA 107097 30 100.0 37 .............................. TCGCCCATCAACTCGCGGGGCAGGTCCTCGTAGACCT 107030 30 100.0 34 .............................. CCTTCGACCTGCCCACGCCCGGCTTCATCGGCCC 106966 30 100.0 36 .............................. GAGCACCATCTTACCGGAGATCGGGTACGACCAACT 106900 30 100.0 35 .............................. ACCCTTGAACTCTACAACTCCCAGCCGCGGCCGGT 106835 30 100.0 33 .............................. CTCGGTGTCGTGGTCCTCGTTGTCGTACTTGTG 106772 30 100.0 35 .............................. CCCGACTCGGAGCGACCTTCGGCGTTGCCGGGACA 106707 30 100.0 35 .............................. CGTACCCAGGTCTGAGCACATCGAGGACAGGTTGA 106642 30 100.0 35 .............................. GTTTGACATGGCTGATACTGTGGCCGTCTGTCGGA 106577 30 100.0 37 .............................. GGGTGGTTGCCGTAGTCGACAGTAGTCCCACCGACGG 106510 30 100.0 35 .............................. GAGCGTGCATCGACAGCGAATGCGACGGCGACCTT 106445 30 100.0 34 .............................. CACCACGTCGTACAGCGACAGCGTGAGCGGGTTC 106381 30 100.0 36 .............................. GCAATGACGGTGACGACCCGCTGACCCGTGACGAAC 106315 30 100.0 36 .............................. GTGACCGAGACGACGGAGTACGAGCGCGTGCTTATC 106249 30 100.0 35 .............................. CACGTCCGTAATGGCGATAGCTCCTACGAGGACTG 106184 30 100.0 35 .............................. GAGATTCGCATCGACGGCGAGGTGACGGATGGGGT 106119 30 100.0 35 .............................. CGCCAGTATCGTGCCCTCGGTGGCCGGAAACGGCG 106054 30 100.0 35 .............................. TTGGGTGCTGGTAAGCATCGCAAGTTCGCTGGGAG 105989 30 100.0 35 .............................. ACTTCCGCCCCGCATGGGTGGCTGAGGTCGGCGGC 105924 30 100.0 35 .............................. ACGCATGGCTGGTTCAATTCCTGCTGGGTCCACTC 105859 30 100.0 36 .............................. CACTGAGCAAGCAATGTCTCTCGGTCCATACGGGCA 105793 30 100.0 37 .............................. TGACTCCACTGACGTGCATCACAAGAACGGAATTCCG 105726 30 100.0 36 .............................. TCTGCTGACCAACTCGACCAGCTATGAGTGTCAGGG 105660 30 100.0 36 .............................. CGTGGCCCCAAGGCATCGCAACGGGATGGATTGCAC 105594 30 100.0 35 .............................. GTCCAGGAGTGCCTGTGACCGCTCCGAAATCGACG 105529 30 100.0 37 .............................. CGTCCGTCTGTATATCTATCTGGTTGTTGCTCAAGTC 105462 30 100.0 36 .............................. CGAGGACAGCGATAAACCCCTCATCGACCATCGCGG 105396 30 100.0 33 .............................. GTCGGCGCTAGAAGCGCAAGTGGACCGACGATA 105333 30 100.0 34 .............................. TCGCGAGGCCCACGGGTCACCGCGTGGTCGTGGC 105269 30 100.0 34 .............................. CCATCATCGAGGCGTCGCATCTGGAGCACCGATA 105205 30 100.0 33 .............................. ACGTACGAGACCGTCTCGTTCTCGGCGGAGAGG 105142 30 100.0 36 .............................. TCTTGTTTTGGATCTCCCCACTAGTCTGAAGGTTGT 105076 30 100.0 36 .............................. GACAACCTGAAAAAGCGCGGCGCAACGTTCGAGCGC 105010 30 100.0 37 .............................. GTTATGCAGTTGCGGCCGCTCCTCTCCTCGACGGCGG 104943 30 100.0 34 .............................. TACGACGAGCTCCGAGCAAGCGACGACGTTGACG 104879 30 100.0 35 .............................. AGCCCGGTCAGCAACGGACATTAGTTACGGCCACG 104814 30 100.0 35 .............................. CACCTCCTGAGAGCAGGTGGCGTCCTCGAAAAAGG 104749 30 100.0 34 .............................. CGTTTGTCGTCCACCCTTTGCGTCTTGGTCGATA 104685 30 100.0 35 .............................. GAGACCTGCGAGTGCATCCGCTTGCCGTCGACCTT 104620 30 100.0 34 .............................. CCGCGAACGTCCGACGAGAGCGGTAACTCCGCGA 104556 30 100.0 35 .............................. TCACTCGAATAACTCCCGCTGAAGTCCTGAATCTC 104491 30 100.0 36 .............................. TCGCAGCGGATGCCGTGATACGGCAGCTCCCACTCA 104425 30 100.0 37 .............................. CTCCCTAACCGCCGGAGTTTGTGTATCGCGGCCATGC 104358 30 100.0 37 .............................. GCTGTCGGGCGAACTAACCGGCCACGGCCTCGGGCTG 104291 30 93.3 37 ....................A........T GACCCCCATTTCCACGTCATCGGCGTAGCTCCGCGAG 104224 30 83.3 0 A............T..T...A........T | ========== ====== ====== ====== ============================== ===================================== ================== 75 30 99.7 35 GTTTCAGACGAACCCTCGTGGGGTTGAAGC # Left flank : TGAGCGGACTGTAGAACATCCGACGCTCAACCGAAAGGTGAGTTACCAGTATCTGATGCGGCTCGAGGCGTACAAGCTGAAAAAGCACTTGCTCACCGGCGAAGAGTACGAACCGTTCCAACGGTGGTGGTGAAATGTACGTTGTAATGGTCTATGACCTGGAAGCCGACCGGACACAGAAAGCCCTCAAAATCGGTCGACGGTATCTCACTCACGTCCAGAACTCTGTTCTTGAAGGGGAGATATCCGAGGGTGACTTGTCCAAGCTCAAAAATGAGATCGATGATTTGCTGAAACCCGGTGAATCGACGATCATCTACGAGCTGTCTTCTGATACGCTGCTCAATCGGACAGTCTATGGCGAAGATCCAACCGAGGATCAGCGGTTTCTATAGTCGGTTTCCGTCGACCCCCCTGGGGAACACGCATTATTGATGGTCGACGGAAGGGCTTTACTGTGACCCGCCGTTAGCGTGCCTATAGCCCGTATATCGGGCATG # Right flank : CCGTCGTGTCCGATGATAATCATTCCTGACTTCCCCTTTCAGACGACTGTTCGTCGACTGATAATACCCAATTTCTGGTAAGGTACACTCCTCACCAGCTTTCGAACCCGTTTTGAGAAATTAATCAGAAAGGTAGTCCTTTCTACGGACCCCTCAGAAGGTGGATAACTTATACACTCGACTGACTCCGCAGGAAGTATGCCCGAGGTCGGCATCTACGCCCGTGTCTCAACGACAGATCAGGACCCACAACGACAGCTCGACGAACTTCAGGAGTTTGCCAAAAGCACGTACGACGAGCCAGAGATCCACACCTACGCTGATATCATCAGCGGGACTGAAACTGAGCGTGGTGAAGAATACCAGCGACTCCGTGTAGATATCAAAGACGGGGCCCTGGACGTCGTTGTTGTCCACGAACTCTCACGTCTTTCTCGACTCGGCGCCGGCGAAATCCACGAGTTCCTTGAGTTCTGTCTCAGTCACGAAACTGGCGTTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTCGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //