Array 1 36543-39132 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCMN010000007.1 Eubacterium callanderi strain DFI.4.62 JMDNNNPC_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 36543 30 100.0 36 .............................. TTAGCATGGGATGGAGTTCCTTTGTTTGATGAAGAG 36609 30 100.0 36 .............................. CCTTTGGAAACAGCAGCGATACCGTGGAAATCATCC 36675 30 100.0 36 .............................. GATCTTATCGGTCGGAGAAGAAATTGAAAGCTCAAT 36741 30 100.0 35 .............................. CCAGTAGCGCCGGATTATGAACAAAGTAAAGTCGA 36806 30 100.0 35 .............................. TTATTCCCTTCCTTTCTGCCGCTTCACCAGCGCCT 36871 30 100.0 36 .............................. AGAACGCGGTTAATGGCGCCGCCCTGGGCGTTTTCT 36937 30 100.0 37 .............................. TCGACGCAAGAGACATCGAACAGGGCGAGAGTACAGC 37004 30 100.0 35 .............................. CAGAATAAAATTCTGGAAGATGCAGTTAAGCAATA 37069 30 100.0 34 .............................. ATATAAAGGGATTTATAAAAATGGTGAGTGGATA 37133 30 100.0 36 .............................. TCTTGTAAAATTAAAAGGACGCCATCTAGACGCCCT 37199 30 100.0 36 .............................. TTTTTTGATCACCTTTTTAGCGCCTTCCACAAAGGC 37265 30 100.0 34 .............................. TATACCTGTAGCTCTCCAAAAGCCCGGACGCCTT 37329 30 100.0 35 .............................. AAGCCTTCCAGCCAGGTTTCCGGATCCGGCAGGCT 37394 30 100.0 36 .............................. TCGTAAAGGGCATAGGCCTTGCGGGTAAAGCTGTCC 37460 30 100.0 36 .............................. GCCAAAGGTAGAGTCTGTAGCATTAGTAGAAATGAA 37526 30 100.0 35 .............................. AGCGCCTTGAAGCCCTGGAAGAAAAGACCGTACAG 37591 30 100.0 35 .............................. TTCCCTCCGAACTGACCGGATAAAGCAAAACGGGC 37656 30 100.0 36 .............................. CTGACAGGGACATCCCGCATGAACATCATGGGCGAA 37722 30 100.0 36 .............................. TAAAACAGGCTGCCAATAATGCCTTTGTACCGGAAA 37788 30 100.0 36 .............................. TAGCGACCGCTCTCAATTACGCTTTTTACAATTTCA 37854 30 100.0 36 .............................. AAAACAATTTCACCATTGTTCAGATCCCAGTAGCTC 37920 30 100.0 36 .............................. GCTGCTTGTTAATTTCTTATCTGCCGGCGGAGCCAG 37986 30 100.0 35 .............................. ATAAATGTAGGAAAATGGCCGAGACGGCCATGGAA 38051 30 100.0 35 .............................. TCATTCAACCCGATTATCCGCTCTATTCCAAGTTC 38116 30 100.0 36 .............................. GCAGTGTGGAGGTTTCTCCGAATAGTGTAAACACCG 38182 30 100.0 35 .............................. TGAACCTAACAATCGCAGGCCTACCCTTCGTCCTC 38247 30 100.0 36 .............................. TCTATTTCGCCTTGTACTTTGTTCGCCCATGCAAAG 38313 30 100.0 36 .............................. TTATGAGCTTGAGTATTGATCACATTACAAAAAAAT 38379 30 100.0 36 .............................. GTAGATTATGGTTTTTGGTTAGAAAACGCCCACGAA 38445 30 100.0 36 .............................. TAACGATTGCGTTAGAGGGGTTAGTAGAATGGAGGG 38511 30 100.0 37 .............................. CTTTCTGCAAGCACGCATTTTAAACCCAGATTGTTGA 38578 30 100.0 35 .............................. AAAATTAGCAGAAGATCAGCCAGCAGAAATAAGAG 38643 30 100.0 35 .............................. TGGTACACAATCCATTCGGGTGATCTAATGGTAAT 38708 30 100.0 36 .............................. GGCACAGAGTATTGAAGGTGACGGCGGGGAATACCT 38774 30 100.0 35 .............................. TGAACCTAACAATCGCAGGCCTACCCTTCGTCCTC 38839 30 100.0 37 .............................. GGGAACCCCATATAGGCTTCTGCATAATCGGGATTGA 38906 30 100.0 36 .............................. CTCAGAGTGTTTATAAGGGGAGTATAACATATTTTT 38972 30 100.0 36 .............................. TGAATATCGGCGTGATTTTCCGCGGAAGTTGGAAAC 39038 30 100.0 34 .............................. AAAGAATGCCGATGACCCTGATGAGGAAGGCTTT 39102 30 90.0 0 ......................C...TT.. | C [39127] ========== ====== ====== ====== ============================== ===================================== ================== 40 30 99.8 36 GTTGAAGTTTAACATGAGATGTATTTAAAT # Left flank : ATGCGTTAAGAATCATAGGCAGGTCTCCTGACTTACGGATTAACATGAACCGACGCCTTCCCTTTCAGTGGCACTTGCCGGTCACTACCGCTTACAGTGATGGGTTCGTTCAGGACTTCCACCTGATTCCCTATTCTCCCCTTATGGGGCACCATATCATTCGTAAATATTAACTTGATCTTTATTATAACGGCATTTTTTTCTTTTTGCAAGCGTTATCTGCAATTTTTATGTATTATAAAAAAAACAATTTCAAGAAATGCCCACAGGGAGTTGCTCTCGGAGGGCTTTGCGCGTATAATTTTATTATGAAAAAGATTTAAGAATTTCCCAGGTATCTTTTGGTGCAGATGGATAAAAAGAACCATAAACAAATGCTTTGGAAAGAAAATGGGATAAAAATATCATAAGCCTTACCTGCCTGGTAAAAATAATAAAAAATGGCTAAGCCAAAAGGATTAAAAGGTATTCGTTAATTTAAGATTGGCTTGATCGCTATG # Right flank : TTGAACAATATTTTACTAAGCTTTTCAGATTAGACTTTGTGAATATTCAGCATAGTTTTACCAGTTGTTGTATTATCACTGTTCTATGGAAAGTTTACAAAGCAGAGGTGCAGCTTGGGCTGGTTTTAAGCATATTATCAGATAATGGATAAAAAGGTGAGGAGGGAAGTGCATGCTTTCGAGGGAAGCTTTTCTGGAGAAATTGAGAAGAGAAATTGATGCAGAGAATCATTTGATCGCAGTCGCATCTGGAACGGGGCTGACGGCAAAATACGCGATTCAGGGCGGCGCTGATTTTCTTCTGGCGCTGAACTCAGGCATTTTCCGCGGGATGGGACGCGGTTCTCTTGGCGGGCTTTTGCCCTATGCCAACAGTAATGATATGGTTTATGAGTTTGGTGTGCGGGAGCTTATTCCGCTGGTGGGTGATTTTCCAGTGGTATTTGGCCTGAACGCCACAGATCCCACAAGGGATATGGCTGCTTATCTCGATGAAATCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGTTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 26985-25732 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCMN010000002.1 Eubacterium callanderi strain DFI.4.62 JMDNNNPC_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 26984 30 100.0 36 .............................. TTCGAGGGTACAAGTTACTTTGAACAAGGATACAAG 26918 30 100.0 36 .............................. GAAATTTTATTTATAATTAAATAACCGTCCTGTAGT 26852 30 100.0 36 .............................. TGGCGAGTTCGACAGTATCCCAGGACCACAGTTGTT 26786 30 100.0 37 .............................. ATGGCATATGGATATGACCAGGCTTTCATACCAGGGT 26719 30 100.0 36 .............................. CCGACTGTTAGGAAAATACTCGTTGCGGCGTTTTCC 26653 30 100.0 36 .............................. ATTCCCAAAGGTTTATTATTTTTTTCAAAAATTTCT 26587 30 100.0 36 .............................. ATTCCAGCAGCGCATAATTCTCATAAAACTTTAAAA 26521 30 100.0 36 .............................. TCGTTATTAAAAACAAAACCGGGATTACTTTCTTTG 26455 30 100.0 38 .............................. TGGCTGTACGCCCAGCAGCTCTAAAATTTTAGGACCGG 26387 30 100.0 35 .............................. TTTTTTTACTACCTAAATTGGAGTGAGCGGATTAC 26322 30 100.0 35 .............................. TCAATCCCCATTGCCTCGACGATCTGAATGGCTTC 26257 30 100.0 36 .............................. GACGAAGATGCACGATTCGAAAATCTGGATGCAATC 26191 30 100.0 36 .............................. GGTGGTAAAAAATGGTGGGAGTCACTGGAGGTTGAA 26125 30 100.0 36 .............................. AGCATTATTTAAAAGAGAAATCCAGCGGCTGACTGG 26059 30 100.0 35 .............................. ATGGCAGCAAGGACTTTCTCTCGGTCGCCGCCCTT 25994 30 100.0 34 .............................. TCAAAGAGAATGAGCTGGCTCTGTCCGGGATTGT 25930 30 100.0 36 .............................. ATGGCTTTTCCGAGATTATTGAAAGCCTGGGCAAAG 25864 30 100.0 35 .............................. ATATAGCCTTCTTTAAACTGGTTATCGCTGTTATA 25799 30 96.7 4 ...........................T.. GAAA G,GGA [25772,25774] Deletion [25766] 25761 30 70.0 0 ........A...T.AA..C.A......TCA | ========== ====== ====== ====== ============================== ====================================== ================== 20 30 98.3 34 GTTGAAGATTAACATGAGATGTATTTAAAT # Left flank : TTTATCCCCTTTAATATGGGAGAGAAGCTATGAGTACAGATAAAAATTTTAATTATAATTATGCCTTCGTGTTTTATGATATTAATGAAAAGCGTGTGGCTAAAATTTTTAAAATTTGCAAAAAATATCTTGTGCATTATCAGAAATCTGTATTCAGAGGAGACATAACCCCTTCAAAATTGATTGCCCTGAAAAACGAACTGAAAAAAATTATTGTTGAAGATGAAGACTTCGTCTGTATTGTAAAACTGCTGAATGGAAATGTCTTTGGAGAAGAAGTCATGGGCATCTCCGAATCCTCAGAAGACCTTTTTCTGTAGTTCTGTTTTACCAGGCACAGAAAATTTTAAAAAGTCAAAATCCTTTTAAACAAAAGGTTTGAGCGCCATTTGAAAGAAGAATTGACGAAAATCTCTGCGGCTGGTAAATTTGTAGAGAAATGGCTTGAAATCAAGGGTCTTAGAGAATATAAATAGAGGAAGAATGGCTTGATTATTATG # Right flank : ACATAAAACAAAAACCGTCAGCATACGCTGACGGTATAAAAAGCTTTTATTCTTCCTCGCTATTCTCGAACAAAGTGTCCTCCTGTTCGGCATAGAGGCTGTCCAACTCCTCATTAAGCAGCTGGTTTGCGAGGATAACTTCTTTGATTTTCTGGACCAGGCCGGAGGCGGTCAGCAGACAGGCTGGGATGATGACAAACCAAAACATGTGAAACATACTGACTTCTCCACCGGTAAAGAAGGTGTATATCAGTCCCCCAAAGCACCCGAGCATGATGACTACGGTCACGATGAGGGTAGCATTGAAGGACATATCCATGGTCAGGGCCACAAAAATGCACAGGACAAAAAGAATCAGGTAGTCCATAGCAATAAAACGTCCTGAGGACAGGGCGGTGAATACCCCCATGCCCAGCATGGCAATAACAAATAAAATCAGACGCAGGGATACGGCGGAATATTTAAAGGCACCGAGGGACACGGCATCAACATTTTCGTAG # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.12, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //