Array 1 200-1836 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTCD01000343.1 Flavobacterium psychrophilum strain FPG102 Contig_470, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 200 46 69.6 29 TAAT.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG 275 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 351 46 100.0 30 .............................................. AGGACGATTATAAATTTATGCTAAATATTA 427 46 100.0 30 .............................................. AGCGATGGAAAATGCGCACGAGCTTACGCT 503 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 579 46 100.0 30 .............................................. AAAAACAATATCGAAAAACTGAAAGAGAAT 655 46 100.0 30 .............................................. ATTTAATGTAATTGTACCCGAACCAGCTCC 731 46 100.0 30 .............................................. TATATCCGTGTTTGAATACACATTGCCACC 807 46 100.0 29 .............................................. CGTTTTCGCACGTGAAATCAAAGTACTAT 882 46 100.0 30 .............................................. TTTTAAAAAATGGTTAAGTAGGAAAACTTA 958 46 100.0 30 .............................................. TCCAGTAAGCGAGATGTCGTATATCAAAGT 1034 46 100.0 30 .............................................. AGCCAATGCCTTGTGTCCTGTTATGTGTTC 1110 46 100.0 30 .............................................. AAAAGATTTAGCAACATAGATGATTGTTTT 1186 46 100.0 29 .............................................. TTTTACTTTTTATTTAAAGCAACTGTAAT 1261 46 100.0 30 .............................................. TAATAAGTTGCTCGTTTCCGTTTATTCCGT 1337 46 100.0 30 .............................................. AGTAGGTAATGTATTCACAATAGACACATT 1413 46 100.0 29 .............................................. AAAACGAAATACATACAGCGCACGCATTC 1488 46 97.8 30 ............................C................. AGGCACTTCTTTAGACTTAAATAAGTCTTT 1564 46 100.0 29 .............................................. AGTAATAGATGGGGGGTTTGAATGCCGTA 1639 46 100.0 30 .............................................. TCATCATCTGATGAAAATTGCTGTTCAATA 1715 46 100.0 30 .............................................. AAGCAAAATAAAATAAAAGAAATATTTAGC 1791 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 22 46 98.5 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : ATGTCATTCCCTACTGATGATGCGGTTCTAAAATCAGTTTATTTAGCTTTAAAAGAAGCAACAAAAAAATGGTCAATGCCAATACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCATCAAAT # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTATGTACTTCGGCATTTTCTCTGCTGGCACAAAATCGTATATAGATCGAAAACTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTAGGTAAGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //