Array 1 4406638-4402710 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036442.1 Klebsiella pneumoniae strain ABFPV chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4406637 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 4406578 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 4406517 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 4406456 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 4406395 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 4406334 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 4406273 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 4406212 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 4406151 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 4406090 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 4406029 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 4405968 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 4405907 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 4405846 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 4405785 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 4405724 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 4405663 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 4405602 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 4405541 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 4405480 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 4405419 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 4405358 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 4405297 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 4405236 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 4405175 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 4405114 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 4405053 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 4404992 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 4404931 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 4404870 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 4404809 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 4404748 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 4404687 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 4404626 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 4404565 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 4404504 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 4404443 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 4404382 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 4404321 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 4404260 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 4404199 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 4404138 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 4404077 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 4404016 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 4403955 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 4403894 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 4403833 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 4403772 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 4403711 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 4403650 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 4403589 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 4403528 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 4403467 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 4403406 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 4403345 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 4403284 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 4403223 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 4403162 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 4403101 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 4403040 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 4402979 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 4402918 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 4402857 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 4402796 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 4402738 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //