Array 1 34316-35522 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUIT01000013.1 Thermodesulfobacterium hveragerdense DSM 12571 G580DRAFT_scaffold00012.12_C, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 34316 29 100.0 36 ............................. GTTGATATTCTAAGCTTAATGTTCCATGGTTTCAGT 34381 29 100.0 37 ............................. GTTTGATAGACGATGACAAGTATTTTTCATCTGGACG 34447 29 100.0 37 ............................. AATAAGAGATTTCATCTTGCTGCTTCTTAAGGGATAG 34513 29 100.0 36 ............................. CTGTGAGTCAGTGAGGGAGTTGACGGATGCGGTATG 34578 29 100.0 36 ............................. ATCAAAACTTCTTCTTTTGTGAGCAAACTTACAATC 34643 29 100.0 36 ............................. AGTTTAAAGAAATCTTTGGTTTTGAACCAGAATTAG 34708 29 100.0 38 ............................. TTTTATAACCAATGTTATCCTGAAGAGGCAAAGATTTC 34775 29 100.0 37 ............................. TTGTAAACATTGCAGGTATAATCATTTCTGCAGCTCG 34841 29 100.0 38 ............................. TTTTATAACCAATGTTATCCTGAAGAGGCAAAGATTTC 34908 29 100.0 37 ............................. TTGTAAACATTGCAGGTATAATCATTTCTGCAGCTCG 34974 29 100.0 36 ............................. CCTATCTTTTTTCTTTTATTATAACATAGTTTTAAA 35039 29 100.0 36 ............................. TATGTATCTCAAAATATGTAAGAATTGATTTAGGAT 35104 29 100.0 36 ............................. CCACAATTGCCTGCTCTACAATACTTTCAAGACACA 35169 29 100.0 36 ............................. GAAGATGCTAATGTATATGAAGTATTGACATATCAA 35234 29 100.0 36 ............................. GACTTTAGTTTAGAATTATTCTAATTTATCGGTTAT 35299 29 100.0 36 ............................. GAGATTTTCTAAAAAATCCCTCTCGCTCTCCCACAA 35364 29 100.0 36 ............................. CTTGAACATGTTTGTTATAAACTCATTCTTTTCATT 35429 29 100.0 36 ............................. ATCGGGGCAGTGGCAGGGGCAAGAGTAAGAGAGTGC 35494 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 19 29 100.0 36 GGTTCATCTGAACCATGTGGGATATAAAG # Left flank : TTTAAGGCGTGGTGGTGAAATATGCCGTATTTGATTGTTACATATGACATAGCAGAAGAAAGGCTAAATAAAGTGAGAAAAATTCTTAAAAAATACTTTATGTGGGTTCAGAATTCGGTTTTTGAGGGAGAGATTAGTGAGGGAAAGTTATTAAAGTGCAAGTTAGAGCTGGAAAAGGTAATCGATAAAGAAAATGATTCTATATATTTTTACAGTCTTGAGAACAGGTTGAACTACAGAAAAACAGTCCTCGGAATTGAAAAGGATATGACAGGGAATATTTTATGATTTTGCATCGAACCTGGTTTTCTGCCAAAATTTGAATAAACTTAATGAATGCTATATAATAAATAAAGATAGATTTTATTATCTTTTTTAAAATCGATTAAAGGTTTGATGCAGATAAAATAAAAATCCAGGTTGTAGATAAAATTATAGATTGTTTTAAAATTTTTATATATAAAGCTTTTGCATGTAATTTGATGTTCTTTGACAATTGG # Right flank : GGGAACTCCCAAATCAATTGGCAATGTTAGAAATATTTTGTTTCTTTAGAAATTAGTAGTATATTTTAGTTAATGTATTCTTTTAACTTTGGAATACACTCGTATGCCTGCTATATTGAGTTTGTCTTTAAAGTCTATCATAGGTCTTCTCATCGGTCCTTTGATGGTTTTATTTTTTATTGCATTTGTAGTTGTTTTTTTAGTTGTTGTGTTTTTAAAAACTTTAGTAGAAGCCTATTTGATTCCTTATCTTATAAAAAAGAAAAAAAGGAGATATTTAAGAAGGCTTCTTAAAGAAAAACTTATCTCCCTTAATGTTTTTATTTATTTTTTAAATAAATATTTCTCAAATATTCCGGTAGAAGTTGGACAGGATAAGTTTTCTCTCCAATTTTCTCTAAATGCCACCACCAGTGGTCAAAAGGATACTTTTGAGGATCATCAAATAAGTCAGAAGGATCTGCCCCTTTTTGTAATACAACTTCTATTAACATAAGATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCATCTGAACCATGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 10378-10603 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384099.1 Thermodesulfobacterium hveragerdense DSM 12571 G580DRAFT_scaffold00031.31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 10378 29 100.0 38 ............................. TAATGCATTAGCCCCCGTTTCATTAGTCAAATATTTTG 10445 29 100.0 36 ............................. ATCGCTTCATTTTAAGTCAGTTCTTTTCCTATTCTC 10510 29 100.0 36 ............................. CTTGGATGCTGGGTTTTTAATTATTTAGTTTTTTAG 10575 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 4 29 100.0 37 GTTTCTAATTCACCGTGTGGAGTTGAAAG # Left flank : TTGCTGGAAGAGCTGGAAAAGGCGTAGCTAAAGGTTGCGCCTTTTTATTTTTTGGCTGTTTTTAGTCTTTGTGTCGTCTACACGACAGAAATTAAAGATTGACAATGGTATAGTGAAAGTGAAAAAGTACACAAATCCAAAGGGTCAATTTTGGGAAGGGGGCAGGAAAGGTGGATTTTGCTTCTCTTAATGGGCTCTCTATGATAGCTCTACTTGGTGCAGTGGTTATTTTGGTTGGGGAACTAGTTGCCTTGAAACAGAGGAAAAACTTAATTCGACTACTCGTAATTTCCAGCATTGCTGAAATCGGCTATATTCTGCTGGGACTTGGTCTTGGTACTTATGAAGGTACATCGGGAGCTCTGTTGCATCTGGAATATCAAATAGTAATGCGGGCATTGGTCTTTGTTGCTGCGGCAGCGCTAATTGCACGAGAACGATCTGACAGTATTGAAAAGCTCAAGGGTATAGGTAAGGCCATGCCGGTTACAGCAACCTTG # Right flank : GCTTGTCTCGGTTTTGAGCCTACCTATAAGGAATTGAAACTTGGAATACCTCTTCAGATTTTAGGGGTAGCGAAAGTTTTGAGCCTACCTATAAGGAATTGAAACTCTTCTCTTTTGAGTTGGCTCGGATAGGAAAGGGAGCGTTTTGAGCCTACCTATAAGGAATTGAAACCCAAGTCCATGAGAAAAAACTCCACATCAGCTTTATCAGTTTTGAGCCTACCTATAAGGAATTGAAACTTTTAGGACACCTTTCGTAGGTGATGACTTTATTGTGTTTTGAGCCTACCTATAAGGAATTGAAACAGCCGTATGTAGAGGTGAGTTTGCATCCTGAAAATGAGTTTTGAGCCTACCTATAAGGAATTGAAACTACCAATAAGGATAATCTAAGCCTAAAATAAACTCCGGGTTTTGAGCCTACCTATAAGGAATTGAAACAGTAGTATAAGCCCACAAGGTCATGGAAGCGGGTTAGGTTTTGAGCCTACCTATAAGGA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTAATTCACCGTGTGGAGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 10613-11779 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384099.1 Thermodesulfobacterium hveragerdense DSM 12571 G580DRAFT_scaffold00031.31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 10613 30 100.0 35 .............................. TTGGAATACCTCTTCAGATTTTAGGGGTAGCGAAA 10678 30 100.0 37 .............................. TCTTCTCTTTTGAGTTGGCTCGGATAGGAAAGGGAGC 10745 30 100.0 38 .............................. CCAAGTCCATGAGAAAAAACTCCACATCAGCTTTATCA 10813 30 100.0 36 .............................. TTTTAGGACACCTTTCGTAGGTGATGACTTTATTGT 10879 30 100.0 37 .............................. AGCCGTATGTAGAGGTGAGTTTGCATCCTGAAAATGA 10946 30 100.0 38 .............................. TACCAATAAGGATAATCTAAGCCTAAAATAAACTCCGG 11014 30 100.0 37 .............................. AGTAGTATAAGCCCACAAGGTCATGGAAGCGGGTTAG 11081 30 100.0 39 .............................. AGCTCTGGATGTATATATGCCCATACTTTCATTTTATAC 11150 30 100.0 37 .............................. CTACCTAAAACACTCCCTGACAAACTCTTCAATAATC 11217 30 100.0 35 .............................. CCTACCCCTACTTCCCCTACTAATCCCACCCCCCG 11282 30 100.0 36 .............................. TATTTTTTTGTTCTTCATCGTGAATGTAGACTTCTT 11348 30 100.0 37 .............................. ATAATTTAAAATAAACTTTAACCAATAAAATGATGCA 11415 30 100.0 37 .............................. GATAAATAACCCAGGGTCCATTAGGACCCCGGGCATA 11482 30 100.0 37 .............................. TGAAGAGGATTCCTCACAAAAAACCACATAAACTCCC 11549 30 100.0 38 .............................. TCAAAAGAAGCTGTGCCTAAAGGAGTAGAAGCTATTGA 11617 30 100.0 36 .............................. CTGACCAAGATGGACACTTTACAGTCATCTTCAGAG 11683 30 100.0 37 .............................. ACAAAATCTCTGAAATATTCTAAGCATTCTCTTGTTA 11750 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 18 30 100.0 37 GTTTTGAGCCTACCTATAAGGAATTGAAAC # Left flank : TGGGGAACTAGTTGCCTTGAAACAGAGGAAAAACTTAATTCGACTACTCGTAATTTCCAGCATTGCTGAAATCGGCTATATTCTGCTGGGACTTGGTCTTGGTACTTATGAAGGTACATCGGGAGCTCTGTTGCATCTGGAATATCAAATAGTAATGCGGGCATTGGTCTTTGTTGCTGCGGCAGCGCTAATTGCACGAGAACGATCTGACAGTATTGAAAAGCTCAAGGGTATAGGTAAGGCCATGCCGGTTACAGCAACCTTGGTTTCTAATTCACCGTGTGGAGTTGAAAGTAATGCATTAGCCCCCGTTTCATTAGTCAAATATTTTGGTTTCTAATTCACCGTGTGGAGTTGAAAGATCGCTTCATTTTAAGTCAGTTCTTTTCCTATTCTCGTTTCTAATTCACCGTGTGGAGTTGAAAGCTTGGATGCTGGGTTTTTAATTATTTAGTTTTTTAGGTTTCTAATTCACCGTGTGGAGTTGAAAGCTTGTCTCG # Right flank : CTAATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAGCCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 3 12293-12928 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384099.1 Thermodesulfobacterium hveragerdense DSM 12571 G580DRAFT_scaffold00031.31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 12293 30 100.0 38 .............................. CCGGAATTTTTTCCGGTTTTTTTCCGGAAATTTTTCCG 12361 30 100.0 37 .............................. TCTAAATCACCTTTTTTATAGGCTTGTTTAAGTCTAT 12428 30 100.0 38 .............................. CCATCACATTTAGGACAAACATAATCAAAACCGCCCTT 12496 30 100.0 38 .............................. TCTTTTTTCAGGGCAAGGATTAGAGCAAGGATTTGTAG 12564 30 100.0 38 .............................. CTAAAGGGCAGCTTGAAGCAGTTTTGCTTTCTATCTTT 12632 30 100.0 36 .............................. AAAGAAAGGATGGAAATCCCTGATGATTATGTGTTT 12698 30 100.0 37 .............................. TAGGTCTTCAGGTTTCAGCCCGTTCAGCAACTGAAAT 12765 30 100.0 38 .............................. ATTTCTGGTCTCCCAATAACCTCAAATGTAGCTTGTTT 12833 30 100.0 36 .............................. TTTTACTCACAAAGGAGTCTCGTATCAGCTTATACC 12899 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 100.0 37 GTTTTGAGCCTACCTATAAGGAATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAACTTAC # Right flank : A # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAGCCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [11.7-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA //