Array 1 5092-7233 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTDD01000005.1 Flavobacterium oreochromis strain NK01 NODE_5_length_97179_cov_11.8803_ID_16873, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 5092 36 97.2 30 ......A............................. GAATGGTAGCAATTCCCCATTTATAAAAAC G,C [5095,5098] 5160 36 100.0 29 .................................... AACTTTTCTCCACATTTCATCTTTAATCA 5225 36 100.0 29 .................................... ATTTTCAAAAACGAGTTTATAGAATATTG 5290 36 100.0 30 .................................... CAAAAGACGATTAGATGATTACGGTTTGCC 5356 36 100.0 30 .................................... CTTCCTGGGTGCACCAGTAAACAAAAGCCA 5422 36 100.0 30 .................................... TCATTGGGTATTGTTTATTTCGATAAACTT 5488 36 100.0 30 .................................... GTGCCTATGGGAAAGACACCGTATGGAGCC 5554 36 100.0 30 .................................... TAGCGATTTATTTTATAAAATTGTTTGTCC 5620 36 100.0 30 .................................... TCTGCCAATAACATAATCTATGTCTTGGTA 5686 36 100.0 30 .................................... CGATATAGTCACCGATGATATCAGTACGTT 5752 36 100.0 29 .................................... TTTTTTACTTACTTCCTCCCGTAAGTTTA 5817 36 100.0 30 .................................... CGATATAGTCACCGATGATATCAGTACGTT 5883 36 100.0 30 .................................... AAAATAACACCTGGAACTAATGAGCAATAT 5949 36 100.0 29 .................................... TTGAAATCTGACCAGTTGTAAGTGGTAGC 6014 36 100.0 30 .................................... ACTTTCCGCCATGGCAAAAGCAATGCTATC 6080 36 100.0 30 .................................... TCTCCAGGAGTGGTTGCGCCTATCGGCACA 6146 36 100.0 30 .................................... TGATTTATGGGAAAAATCTTTATATGGTGG 6212 36 100.0 30 .................................... CACTCTGCATTTAGGAAATGAAATGTTATA 6278 36 100.0 30 .................................... TTTCAGCGCATCGGGGAGTTTGTCAGAGTA 6344 36 100.0 30 .................................... CAAATACATATTGTTCATAATGGGCGTTGT 6410 36 100.0 29 .................................... TTTTTTCTGCAAAGTCCAAGCTCAATTCA 6475 36 100.0 30 .................................... TGTACACCTACGAAGAAATACGCTTTATAT 6541 36 100.0 30 .................................... AAAAACGTTGTGCGCCCTGCCGGCGGGGCG 6607 36 100.0 30 .................................... TCCAATAATCTATTGAATTTATCAGAATAG 6673 36 100.0 29 .................................... CAAAAAGTAATCATTCAAGATTACACCCA 6738 36 100.0 29 .................................... TATGCGGGGGTGAAATTGCAAGTCATCAA 6803 36 100.0 30 .................................... ATACATTTAAAACATCTAAATAATCCCTCA 6869 36 100.0 29 .................................... CCAAAGCATCTAAACACTTCATCTTTGCA 6934 36 100.0 30 .................................... AAGTTCTAAATCGCCAACCATAACTACACA 7000 36 100.0 30 .................................... TGACGCTTGGGTCTGATGGCGTAGCCGCAA 7066 36 100.0 30 .................................... TCATTTGACGGAAAGCCAAGAGGGCTTGGG 7132 36 100.0 30 .................................... TTAGACCAGTCGAATCGAGCAATGAAATAT 7198 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 33 36 99.9 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : AAAGAATTAGTTAATAGACTCTATAAAGTGATTGCATTTGAAAGTGATGGAAGAATTCAATTTAGGCATCACAAAACAGCTTTGCAACAAAGTAGTACAAATAAAGAAGAGCTAACTATAGTAAAATTTATGGCAGATAATGGGTTAAAAAATTCTCAAATTGATTTTACAAATCCATTGCCTTGGTTAAGATTAACAATGTCTAATTTTAACTTTTTGTTGAATAAAAAAGAGTTTGAAATTAACTCAATAGGAAAGATTTCATTTTATTAATAGAAATAAATACCAATAAGTAATTTTAAAATACATCATGTTTTTAAAACTTATAAAGCTTAGAAGTTCATTGACATTTTAGTTTTTATATATTTTTAGGAGTCAAAATATTAATATTTAATGATATAACAATTTACTGTTTTTGATTTGAGTTTTATTATTGGATCGGTGTTGTGGTTTACAAACACCTAGTTACTATTTGTTAGAGGTGTGTTTGTGAATCTCCC # Right flank : TAGTTGAGGTGTAATCTTCTGATATTAAAAGAATTAGTTTAAAATATCGTTTTAAAAAATGCTTCTTTTTTGCCTTGATTAAGCAAGATTGAAGCATTTTTTTGTTTCTAAAATAATTCTAATTGAGAGGGTTGTGGTGCGGTAGGAACCTCTGTTTTGCCCCAAAAGTTTTGAATGTTACCAAATTGCTTGTCCGTAATCCGTAAAATACTCACTTTGCCTAATGGAGGCAAAAGTTTATAAATGCGTTTTTCGTGTACGTCAGCACTTTCACTACTAGCGCAATGCCGTATGTATACTGAGTACTGCATCATATTAAATCCATCTTTAAGTAAATTGTTTCTAAATGAAGAAGCATTTTTGCGATCCTTCTGGGTATCCGTTGGTAAATCAAAAAAGACAAATAACCACATAATTCGATAACCATTTAGTTCCATAATTTAGGATATTTTATTTTCTTCCGCTCTCCAATAAAACAACCTTGTAGGGAATAGGCTGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 26385-25494 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTDD01000021.1 Flavobacterium oreochromis strain NK01 NODE_21_length_51430_cov_11.9258_ID_16911, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 26384 36 91.7 30 ....G......................G.C...... TTTTTAATTTCTTTTGCGCGACTTTTAATT 26318 36 91.7 30 ....G......................G.C...... ATTTATTGTCGTGGTCAAAGTCTTTGATCA 26252 36 91.7 30 ....G......................G.C...... TGCTTAACTTCTTTACTTTTCTCAATTTCC 26186 36 100.0 30 .................................... CCTGGGCCATCAACATACAAAACAGTACCT 26120 36 100.0 30 .................................... CGCCATGAGCCTACGTACACGGTGTTGTGG 26054 36 100.0 30 .................................... AAATGCCTTTTCAACCACCATCTGGTCCTA 25988 36 100.0 30 .................................... TCGTCTGTTACTACTAAATACTCTTCGTTT 25922 36 100.0 30 .................................... GCCACCAAAGGGAAAATTCTTGCAATTTGA 25856 36 100.0 30 .................................... TTATATAATGATACCTTTACTAATATTGAT 25790 36 100.0 29 .................................... ATGGTTTAATTATACTTTTAAGCCAAGCA 25725 36 100.0 29 .................................... CATTTTCAAAGCCTTTTGAAAAGGAATGT 25660 36 100.0 29 .................................... TAATTTAATTGAATAAAGCCTTTAAGCTG 25595 36 94.4 30 .......T....T....................... AATCCAAATAAATGCGTTTACGTAAGCATT 25529 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 14 36 97.8 30 GTTGTGAAAGCCCTTATTTTGAAGGGTAAATACAAC # Left flank : TTTAGGAAATATATAGAAGAAGGAATTTTAAATAAAATACTTCCTAATGAAAATCAAGTCGAAATTTTAAGAGGAATAGATTTCGACGATTTAAGCTGGGCATTTGACAGTTCTGAAAGAAATGAGGAGCAAAAAGAAAAAATAAATCTATATTATCAAATTACTAATCCACAAGTTCAAAGAGGTTTAATTTTAATTATGATACGCAATAAAATAGCACACAATCAATATCCACCAAAATACATTTACGATCTCGCACAAACATTTATTCCTAAAAAAGAAAACGAATATTTTGCAAGCTATTTTAATCGTGTTTTTAAAGAAATGACAAAGAAGTTATTGGAAAGCTTAGAAAAAAAATAAACGATCCTTGTTCTTTGACAAACTGAATTAGAATTTTAAAAATGACTATTTTTGTATCTTATACAATAAAAAAAGTTTATTTTTTATTTAAAAATATTGTAGATATCCCTTGATAATTAAGGCTTCTCAACATTACT # Right flank : AAGCAAGAGAAGTGTAGTTCTTATAGAAAGTTGTGAAAGCCCTTATTTTACTCACGTTATTTCTACTGTTTTTTATAGGAGTTCGTGAATGATTATTTGAAGGGTAAATACAACTTGGTTGAGTAGTGAATGTTAATAAACTTAGTCATCTATTTTTTGCCAATTATTTTTAGTGTATGTTTTCCAACTAAATTATTTCTAATAAAAAACCGATGACTTATATTTGAACAATATAAAATAGGCTGAATAATTTATAATTCTGAATACCTTAAACTTCTACACTTACAAATGAGAACACACTTCATAGCCATAGGCGGTGCAGCCATGCACAATTTAGCACTAGCATTACACAACAAAGGATACAAAGTAACAGGTAGCGATGACGCGATTTTTGAACCTTCTAAATCACGATTAGAAGCTAAAGGATTATTACCAGCCGAATTAGGTTGGTTTCCAGAAAGAATCACATCGGATATTGAAGCGATTATTTTAGGAATGCA # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAAAGCCCTTATTTTGAAGGGTAAATACAAC # Alternate repeat : GTTGGGAAAGCCCTTATTTTGAAGGGTGACTACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //