Array 1 37337-38646 **** Predicted by CRISPRDetect 2.4 *** >NZ_JSNO01000052.1 Escherichia coli strain upec-137 upec-137_ctg_891, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 37337 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 37398 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 37459 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 37520 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 37581 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 37642 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 37703 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 37764 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 37825 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 37886 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 37947 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 38008 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 38069 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 38130 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 38191 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 38252 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 38313 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 38374 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 38435 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 38496 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 38557 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 38618 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //