Array 1 2014-4016 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGSU01001146.1 Hydrocoleum sp. CS-953 1146, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 2014 37 100.0 33 ..................................... TCACTACTTACTTAAAAGTGCACACTCTATTGT 2084 37 100.0 35 ..................................... CAAATTCACATATGAGGTGGTAAGCACAAAGACAG 2156 37 100.0 37 ..................................... TAGAGTTTGCGTATAGGCAGGGTGACCAGGAATTATT 2230 37 100.0 33 ..................................... CAACTTTAAGTGCGAGGTTCCGCTCTCGGTTAA 2300 37 100.0 37 ..................................... GCCAATAACAATTATTTGGCATGAAAATATTAGAAAA 2374 37 100.0 36 ..................................... GAAAAATTGCTTGTCTGTCATAACAAGCTGTTTCCA 2447 37 100.0 37 ..................................... ATAAACTCAATTGTCCAAGGCTCTGTTTTATAATCAT 2521 37 100.0 37 ..................................... AACGGATTTTAAGTGCTTTACTGTTTTTGCTTGGAAT 2595 37 100.0 36 ..................................... TGGAGTTTCTGGATTCTAAGTATTTCTTCTATCAAC 2668 37 100.0 37 ..................................... TTTGATAAATCATATCCCTTATCCAACTTATCCATAT 2742 37 100.0 40 ..................................... TTTTAATATTTCAGAATTAGCTTTAGATAATTTTCCTAAG 2819 37 100.0 34 ..................................... TTTCTTACTCAGCTCGAAACGGCGTAAACGCTCG 2890 37 100.0 37 ..................................... AAAAATTTCACCCCTAATCAAATCGAGCAACTGAATA 2964 37 100.0 34 ..................................... AGGAAATGTAAAAATCTTATTCGAGAAGCATAAT 3035 37 100.0 36 ..................................... CAATTCCCTCAGATCGTTTTCCCAAAATTAGTTATT 3108 37 100.0 35 ..................................... ATATTCATCATCTTTATTTTCTATATCTAAACTAG 3180 37 100.0 39 ..................................... TCAGAAAATCCTAATCTTAGATTTTTATTTCTTACTCTA 3256 37 100.0 37 ..................................... CTAAAGCTATTGTTTCTTCTAAGTTTTCTGCTGAGAA 3330 37 100.0 37 ..................................... GATAATTCCTGCTCTGTCTATCAAGCTGTCCTTGAAA 3404 37 100.0 36 ..................................... TACTCCTCTATTTGTCAGTGCGGTTTTTAGATCCGC 3477 37 100.0 38 ..................................... GCATAATCAACCGACTTAAATTGGTATTTTTCTATTAA 3552 37 100.0 31 ..................................... TAATTCCTGCTAAAGAAATTGCCTCTGCCTC 3620 37 100.0 38 ..................................... GATAATAATCCTTGCTGTAATTTAAGCTTGGCCCTACT 3695 37 100.0 33 ..................................... TTTAATGGCACTTTTGGTAAATTGTTTGGGAGG 3765 37 100.0 35 ..................................... TTAATCCCCCATGGTTGCTCCCCTGGCTTTGCCGG 3837 37 100.0 35 ..................................... CGACGATACTCTTGGTTTGGAGTTCTCTAGCTGGA 3909 37 100.0 33 ..................................... ATCTACAGACCAAGAATTGGGAATATCAACAGA 3979 37 89.2 0 ...G.....G......................T...T | C [4011] ========== ====== ====== ====== ===================================== ======================================== ================== 28 37 99.6 36 GTTTAAACTAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : GTGGGAGGTTTGATTCTGGGTTTTGGGGGTTTGATCGGGGCTCAAATTAGCACTCGTTTTCTGCCGAAGTTGTCTAGTTCAGTTGTTACTTTTGCTTTTCGGAGTTTGTTGGTAATTTTGGCTATTTATACATTCTGGAAAGCTTGGGACATTTAGAATTTAGAATTTAGAATTTAGAATGCAGAATTTTAGAAGATATTCCAAAGTCGGCCATTTTTTGAATTATTGGGCCAATAAAATTAGGCTATTTTGCGCGGATGGGTAGCTGTAGAAGAGAGAGGGTGAAAAAAAATGGCTGAGATTGAGTATGGGAAAGGGTTTGAGCTTTGTGGGAGGTTAGAGGCGATCGTCGCAACTTTTGTATTGCTTGGCTGGCAAGGGTTTGGAGGATTTTGTTTGGGTAGGGTATTGCAATTTTTTCAATCTTCATGCTACTTTAACTATGGTCATCGCAAATGTACCTTGAAAATTAAATATGGTAAGGGTTCTAGAACCCTGCT # Right flank : TTCCTAATTCTGCATTCTAAATTCTAAATTCTTCATTCCTAATTCTGCATTCTAAATTCTAAATTCTAAATTCTTCATTCCTAATTCTGCATTCTAAATTCTAAATTCTTCATTCCCAATTCTGCATTCTAAATTCTCAATTCTAAATTCCAAATTTATCCTTTAACGGCACCTGCAGTAATACCTTGAACAATTCGCCGTTGAGCTATTAATACTAAAATTACTAAAGGAAATGTACCTGTTACTGTTGCTGCAGCAATTGGCCCATAGGGAATTTCAAACAGAGAAGTACCACCTATTTGAGCAACTGCAACGGGAATAGTATACATTTCTGAACGAGTAATAAAAGTCAGGGCAAAAATAAACTCATTCCAAGCAAAAATAAAGGTTAAAATTCCTGTAGTTACTAATGCTGGAATTGTGAGAGGTAAAACAATATTCCACAACATAGAAATTGTGTTGTAACCATCTATTTTTGCCGAGTCTTCTATATCTTTTGG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACTAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 2569-4872 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGSU01001197.1 Hydrocoleum sp. CS-953 1197, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================== ================== 2569 37 100.0 35 ..................................... CCAGAGACGGAACCCTAACAGTAATTTCTTCTGGA 2641 37 100.0 34 ..................................... TTGAAGATTGGGCACACTTTGATTATAAATTCTC 2712 37 100.0 36 ..................................... CAACATCTTCTAAAGTAGGATCTTCACTTTCTAATC 2785 37 100.0 37 ..................................... CCAGAGACGGAACCCTAACAGTAATTTCTTCTGGAAA 2859 37 100.0 34 ..................................... TTGATATTTATTTGGTTGGCAATGATAATTTCTT 2930 37 100.0 34 ..................................... TATAAATTGCAGGATTTCTTCATGCCAGAAGATT 3001 37 100.0 39 ..................................... ATTTCATCAGGAAAAAATAATTAAATAAACAGGTGAATG 3077 37 100.0 34 ..................................... TTGGGGGCTATTTATAGAGATTCAGAAATTACCA 3148 37 100.0 36 ..................................... ATACTATGAAAAAAACTTGCCCTTACTGCCAAGGAA 3221 37 100.0 33 ..................................... ATCCTATTAAACAACATTTTACTATTAATAAAT 3291 37 100.0 34 ..................................... AAAATTAGGTATATCCAGGAGTTCAGCGTACAAC 3362 37 100.0 37 ..................................... TGACTCTGGGATTTCTTCCTCTAAATCTTCTACAATT 3436 37 97.3 34 ..........N.......................... AAAATTAGGTATATCCAGGAGTTCAGCGTACAAC C [3447] 3508 37 100.0 37 ..................................... TGACTCTGGGATTTCTTCCTCTAAATCTTCTACAATT 3582 37 100.0 34 ..................................... CAAAACGATGGTTTGGCCGATAAGCCATCGCCAG 3653 37 100.0 34 ..................................... ATCTTTCCTACTCCCTTCCTTTCAATAAAGTAAC 3724 37 100.0 36 ..................................... AATAAATCAGGATGTAAGATAATTTTATCATCTAAA 3797 37 100.0 36 ..................................... AATAACATGGTACTATCTAAACCACCTGCACGTCAA 3870 37 100.0 35 ..................................... CATTATTATCCTGGAATGATAAGCCCAAAAACTCA 3942 37 100.0 36 ..................................... AACTGAAACTGTTCTGGATAATCTATCTTCTGGCTA 4015 37 100.0 36 ..................................... CATTACCGGAATCAACACCCAAGTATACCTGCTTTG 4088 37 100.0 34 ..................................... TTTTCAGCCAGATGCTCTTCTATCTGGTTTACCC 4159 37 100.0 35 ..................................... AAAGGACTCCCTGAATTATTAACGAATACATAAGA 4231 37 100.0 41 ..................................... GAATTAATTGAAAAAGTTATGCTTACTGACAAACAATGCCN 4309 37 100.0 35 ..................................... AAAGGACTCCCTGAATTATTAACGAATACATAAGA 4381 37 100.0 41 ..................................... GAATTAATTGAAAAAGTTATGCTTACTGACAAACAATGCCT 4459 37 100.0 34 ..................................... CCGCTGGCGAATGCTATCTAATATTAGAAAAAGA 4530 37 100.0 50 ..................................... CTTTTTCATCCCATATTATGGAAATTTTAGATGAAAAATTTACCTCAAAA 4617 37 100.0 38 ..................................... ATGCTAGGGGAACGCAACTAAAGGTAGTACAAATACCA 4692 37 100.0 34 ..................................... TTAGTAGAGCATTTCAATATCTCACTAATTTCAT 4763 37 100.0 36 ..................................... TTTAATTTATTGTATGTATTGTTGTCTGTTATTTTT 4836 37 94.6 0 ...........T.A....................... | ========== ====== ====== ====== ===================================== ================================================== ================== 32 37 99.7 36 GTTTAAACAACAACTAATCCCTATTAGGGATTGAAAC # Left flank : AACTTACCAGTTCCCATTGCAGATTTTGCTGCAATAATTGGTTTAAACAACAACTAATCCCTATTAGGGATTGAAACCCCTGTTTTTTTGCTTTGATATTGCTATAGTAACTCAAGTTTAAACAACAACTAATCCCTATTAGGGATTGAAACCTAACAAAAAGAATACTGCCTAGCATTGATAAAAGGTTTAAACAACAACTAATCCCTATTAGGGATTGAAACTAGGAATAGCACTCTTAGATATCAGAAGAAACTTGTTTAAACAACAACTAATCCCTATTAGGGATTGAAACAAATCAGTTGACGTCAGTTATTATTTTTTCAGAGGTTTAAACAACAACTAATCCCTATTAGGGATTGAAACCCAGAGACGGAACCCTAACAGTAATTTCTTCTGGAGTTTAAACAACAACTAATCCCTATTAGGGATTGAAACNCAACTAATCCCTATTAGGGATTGAAACAAATCAGTTGACGTCAGTTATTATTTTTTCAGAG # Right flank : CAGAAACAACAGTAGAGAGACAACCATAATCTGTAGGGGCGATTTCCCACGGAATGCTCCGCAAACGCGAATCGCCCGTACAATATCTACAAAATCCCTTTCAGCAATTGAAACTATTAACTTTCAAACCAAATTCTTTACACTTTCAATAGCACTTTCTGGAGTATCCACGACAAAAACTGTTTCAGGAGACAAACCAACAAAAAAAGCCTGACTTGCCAAACTACTACCCAACAAAATCACTTTTTTATTATTCTTAATTGCCAAAGCAACCTCCGAAGCAGTACCCGCTCCCATCCCACAAGCAATCACAACATCACTAGAAAGCACATTAATATTATTCCGACTATTACCCATATCAGTAACAATAGGAATATCAACCGCCTCAGACATACCATCAAGATTATTTCCAGGCAAAATTCCAATAGTCAAACCATTAGCAGACTTGGCACCCCGACTCGCAGCATCCATCACCCCCATATTCCGCCCACCCGTCAATA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACAACAACTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA // Array 1 3809-6901 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGSU01001444.1 Hydrocoleum sp. CS-953 1444, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 3809 37 100.0 36 ..................................... GACATCTCTGATGATGACCTTATACGTCAGCGTAAA 3882 37 100.0 33 ..................................... TAAACCAGAACAAACTATCAAAGCCGACCATAC 3952 37 100.0 37 ..................................... ACTATCCTACATAGAATATCTCCTATACAATGTGCTG 4026 37 100.0 31 ..................................... AGCAATCAAGCCTATCCTTGCTTAGTTGATG 4094 37 100.0 36 ..................................... GCCTGCCCACCTTCTGCCAATAAGGATTTGGATAAA 4167 37 100.0 33 ..................................... GTAAAGTAAGCTTCTCGAGCATCCAAAGGTTTT 4237 37 100.0 33 ..................................... AGCCAATCGCTCTGCATAACAATTTAAACAGCC 4307 37 100.0 38 ..................................... CTTTAATTTTAATTATTTCATTAAATTCTGAAAAAAGA 4382 37 100.0 34 ..................................... AAAGATGGTATAACTTACCTTACCTAACTTAATT 4453 37 100.0 36 ..................................... CACATTTTAAATGAGCCAACCAAATTACCGCAAAAA 4526 37 100.0 39 ..................................... AAGCAATTTTCACTAATAAATTCTGCTACTAACACTGCA 4602 37 100.0 43 ..................................... TTGCTGTGCTGCAATTATTCTTAACTTGCGATGAATTGCGAGG 4682 37 100.0 35 ..................................... CTGCTTATGTTGCCAACCTAATTGAAGAAAAATTA 4754 37 100.0 35 ..................................... ACTATCTCCATCTAGTAGTTCCTTGTCTTGTTTAA 4826 37 100.0 42 ..................................... ACTAAATTAGGTGACTGACTGCTGACTGTTTTTGTGGGTAAC 4905 37 100.0 33 ..................................... AACTTACCTCACCTATCTTTTTCCGAAATATTA 4975 37 100.0 35 ..................................... AAAAAAGCGTTCAGAGATGCCGACGACAATGGCGA 5047 37 100.0 35 ..................................... CTACAGTGACATCAGATATATTAAAGATTCGGTAA 5119 37 100.0 35 ..................................... GAACCAATATTTGTTACAGAAATCATCATAATAAA 5191 37 100.0 40 ..................................... TGATTTGATTTTTAACTCTCTATCCATGACTGATTCAATC 5268 37 100.0 34 ..................................... AAACAAAAAAAATACTTTTATAAGCAACAGAGAG 5339 37 100.0 34 ..................................... AAAAAAGCATCATGCTAACTAACAATATTAGACC 5410 37 100.0 34 ..................................... CCTCTATCGAAAATGGATTAATATCTAAATGCTC 5481 37 100.0 41 ..................................... TCAGCAGCTAGAATAGGAACCCCAAAAGCTTCACAAGCAAC 5559 37 100.0 42 ..................................... TTACCGCTCCCACTTTTGCCCCAAAGGACAGTAATAGGGAAA 5638 37 100.0 37 ..................................... AAAGCAAGGCTTTACTCCATAGTCCTGCTTACCATCC 5712 37 100.0 42 ..................................... GTGTCCTTTCCTACCTCACTGGTGAACGCGACATATTAAAGG 5791 37 100.0 35 ..................................... GCACCTGTTGCAGGGCACAGGTATATAGTTAATGG 5863 37 100.0 34 ..................................... CTTATAAAGTAGACTATCCTCTTTGCTGGAATGA 5934 37 100.0 38 ..................................... AATCATTATCGCAGGAAAAAATTACTTTTAAAGGTTTA 6009 37 100.0 34 ..................................... AATTTGGCAAAGAGCAAAAATATTTTTAACTAAT 6080 37 100.0 38 ..................................... TTAATATGCGCTCGCTAATGCACTTTTTGGATATGAGA 6155 37 100.0 39 ..................................... AATAGATTTTGGTAGTCACCCTCCATCATTTTTTTTATT 6231 37 100.0 34 ..................................... TTTGCCAGCCTTCTTTATTATAAAATCCGCGACA 6302 37 100.0 36 ..................................... AGATGCCGGAGAAATTGACATTGAAACTTACGAAGA 6375 37 100.0 36 ..................................... TACTATAAGTGACTCCGTATCAAACGATACGTTTCT 6448 37 100.0 41 ..................................... GCTGGTAGTATCTCAAGAACGCTACCTGCTGTCGGCGATCC 6526 37 100.0 38 ..................................... AGCAATGAATATATCGACAAGCCTGGCGAGAATTTTAG 6601 37 100.0 34 ..................................... ACGGTAGTGCTGGTAGAGTTGTGCTGGAAATATA 6672 37 97.3 10 ..........G.......................... ACCTAACATN Deletion [6719] 6719 37 100.0 38 ..................................... AGCAATGAATATATCGACAAGCCTGGCGAGAATTTTAG 6794 37 100.0 34 ..................................... ACGGTAGTGCTGGTAGAGTTGTGCTGGAAATATA 6865 37 97.3 0 ..........G.......................... | ========== ====== ====== ====== ===================================== =========================================== ================== 43 37 99.9 36 GTTTAAACTAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : AGACTGGGGTTAGAATTTAGAATTTAGAATTCAGAATTTAGAAGTTAAAAGTCTAAAATAGGCCATTTTTTAATTATTGGGCTAGTCAGATTAGGTTATTTGCGCGGATGGGTAGCTGTACAAGAGAGGAGGTGCAACAAAATGGCTGAGGTTGAGTCTGGGGAAAGGTTTGAACTATATAGGGTTGTTCAGGGGATTCGCGCAGTTTGCCAAATCTTTATGTGGCAATGCTTGTGGCGTTTTTTTTGGAGTGCCTCTTGTCAAGCTGTGACTGGAAATGCTATATTTACTCATGTCCCGCGCAAATGCACCTTGAAAATTAAATATGGACTGGGTTCCAAAACCCTGCTGTTTAAACTAACTAAAATCCCTATTAGGGATTGAAACGACATCTCTGATGNTGCCTCTTGTCAAGCTGTGACTGGAAATGCTATATTTACTCATGTCCCGCGCAAATGCACCTTGAAAATTAAATATGGACTGGGTTCCAAAACCCTGCT # Right flank : CACCTAACATAACTCCTGCAATTGATTTTCTTCATTCTTTTTCACTCAATAATTTCATCGTACTGGTTATTATCCTCTTCTGCTTGCTGTTTCATAGAAGTCAGAACCTCCTCTAATGAAGTTTTATCTAACCACTGATGACGTTCTTGGGTATAATCTCCACAACCAGAACTATAGTATTGAAGAAATCAGAGCGTATCAACAACATTCATAACTTTTGTTAGACAGAATTTATTTGAAAATAATATCATATATAGTAGCTAGTTTTTGTAGGGTGCGTTAATAAAATGTAACGCACCGCCTCAATGGTAAAACTACCCCAGTGTTCAACGGTGCGTTACGGCGCAATATAATATTTGACAGCTCAACCGTAGTTTCTAGTAAGCGCCTAACGCACCCTACTGGACTACTACTAAACTTATTATATAGACTAACTTATATATACAACATGATACAACTAAAAAAATGGCAGTTAGCAATGCTCGCTATTCCCCCGCTTG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACTAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 2088-1536 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGSU01000281.1 Hydrocoleum sp. CS-953 281, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 2087 36 100.0 36 .................................... AACTGTCTTGGTTGTTCCGTCAGGTTGTTCGACTTC 2015 36 100.0 38 .................................... TCTTTATAGTATCTTACTATTAAATTGCAAATAGGATG 1941 36 100.0 38 .................................... AGCCTGGGGTAGGTTCCCCACGGCGACGGTAAGCCCAA 1867 36 100.0 36 .................................... CTTCTGCTTTAGAAGCTTGCTCTTGGATACACTCAG 1795 36 100.0 36 .................................... AGTATTCGAAGACGTAGCGAACATCGTGTTCGCCAA 1723 36 72.2 41 ..AC.TCTTT..A..C..N................. CGGTTTTTGATGTTAACCCAATATTTTTTATATTGGGTTAG 1646 36 100.0 39 .................................... AATAAGGCAAGATAATAAAGTCCAAATAAAAAGCGTTAG 1571 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 8 36 96.5 38 CTTTCCAAACCCTAATCCCTATTTAGGGATTGAAAC # Left flank : AATTGACTCAGATTGGCAAAAAATTTATTATATCTGTATTAATTACTTAATTAATGGCTAAAATGTCGCCTAAGTATAGCATTACTTTTGCTAATTGGTATTATCTACTCCCTAAAATTTGATAAAAGGACTATCAAAAATTGATTTTTTCGTCCACTTGACAGGGATGAAAAGTAAAAGTTAGTATATTTACAGTTAGAAACCTTGATAAATAAATAGTAATAAGTTTTTTGTCATTTCTTGTTTGTTGAGAGTGGCTAAAGGGTCGTTTTTCATCTTTGCATGATCCCCTATCGACGGGGGTCTGTAAATCGCTGAAACCCTGATTCTTTCGTTGACCCCCGTCGTTAGCGTAGCTCCTCCGCAGGAGGCTGCCATGCCAGCAGCGGGTTTGAACCTCGTCATTTTGGTAAAATTAGCCTTGTTGATTTTTTTATCAAAGGGGCGCGTCGATTTGGGTATCTGAAACCCTTGCTATGTCTGGGTTCTAGATCGTAGCT # Right flank : ATGATATCCATCCTTCTATCTCTTATTATCAGCCTCTTTCTATAGATTGATGTTTTATTCATCTGTTGGACAATAGTTAATTGCCTCAAACCCTTTACAGGTAAAAGTTTCAGCCTTTTTTTTTACATTGATGTTTTATTCATCTGTTGGACAATAGTTAATTGCCTCAAACCCTTTACAGGTAAAAGTTTCACCCTGTTTTATATCAAAGATTGATGTTAATTTCATCTACACGACTTATGCAAAGGCTCTATATATAGTGGCTTGTGCGTTACGCTAGCGCTAACACACCCTACCAATAGCGTTCATGCGTAAGTCCTAATCTATTAATTCTTTTAACTGAACACTATTGCAAAATATGCTCGCTTATCACCCAATCTCTCCATCACCCAATCACCCCATCACCCCATCAGCAAAATTCAACGCACATAAGAAGCACCATTAATATCAATAGTTGCTCCTGTGGTATGAGGTGCTAAACCAGAAGCTAAAAAAGCTAC # Questionable array : NO Score: 9.08 # Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCAAACCCTAATCCCTATTTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.10,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA //