Array 1 195143-192555 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCPA01000004.1 Klebsiella pneumoniae strain COL-Kpn100 contig_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 195142 29 100.0 32 ............................. CTGCTGACGACGTGGATCCGCTGGAACGTCAC 195081 29 100.0 32 ............................. TACTGGCAACGGAATTCGGTTCGACGTTTATG 195020 29 100.0 32 ............................. CGCTCCCCAGGACAAACGCGGTCTCCGGATCC 194959 29 100.0 32 ............................. TTGCACGCACGTGAATAGTCCAGGCCGCCTGG 194898 29 100.0 32 ............................. TCCAGCGTGTGCATCTCGCCGATCTCTTTTTG 194837 29 100.0 32 ............................. TAGGGTATCCCGTTCTCATCCACGGCAATATG 194776 29 96.6 32 ............................T TGAACTGATCAAGGGGCGGCTTCAGGCAATTG 194715 29 100.0 32 ............................. AGTAACGAAACGGTCGCACTCAACCGCGCCGC 194654 29 100.0 32 ............................. TCTTGTTAGTGATTGAGTAGCCCATCTGGGAC 194593 29 100.0 32 ............................. CTACCCGTAAAAAAACCGCTGCCGCTGTCGCC 194532 29 100.0 32 ............................. CTCTTAATGGAATTCGTGAAGACGCTGGCCTT 194471 29 100.0 32 ............................. ATCTGGCGAGATTTTACGGGAAATAATATCCC 194410 29 100.0 32 ............................. GTTTTGACCGAGTATATCTGGCGGGATACCCC 194349 29 100.0 32 ............................. GTCCTGGCTGACCCGGACGAATTTGTTGTGAT 194288 29 100.0 32 ............................. GCGGTTTGCTATCAGATGAGCCTGTCATCAAA 194227 29 96.6 32 ............................T GCTGCACGATGTGATTGAGAGATGCCGGGAAG 194166 29 100.0 32 ............................. GGTTTATAGAGGCTGAGGTATTCACAATGCGC 194105 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 194044 29 100.0 10 ............................. ACATAGCGCC Deletion [194006] 194005 29 55.2 0 CGA.A.G.A...........T.GTGTT.C - Deletion [193977] 193976 22 75.9 32 -------...................... GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 193922 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 193861 29 100.0 32 ............................. AGCTGCGTGACGTTGAAAAAGATGGCTGCGGG 193800 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 193739 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 193678 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 193617 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 193556 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 193495 29 100.0 32 ............................. TCTTCGAGTTCAGGCCGGTATCCCACTCGCTC 193434 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 193373 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 193312 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 193251 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 193190 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 193129 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 193068 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 193007 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 192946 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 192885 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 192824 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 192763 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 192702 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 192641 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 192583 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 44 29 97.7 31 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCTTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCAACACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //