Array 1 9-13233 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025958.1 Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================================== ================== 9 36 100.0 38 .................................... CTGGCCCAGTCCGGCCGGATGTTGTGCAGCCGATCGCC 83 36 100.0 36 .................................... GCCCGGCCCGTGCTCCCGTGCGGCCCGGGTCAGACC 155 36 100.0 37 .................................... TCTGCTTCGCGTCCTCCGGGCTGTCCGCCTCCACGCG 228 36 100.0 35 .................................... GTGGACACCCACGAGCCGGTCGTGCTCGTGGTGTC 299 36 100.0 36 .................................... CAGTGCCCGCACTCGGCGTAGATCGGCTCACCGTCC 371 36 100.0 36 .................................... GTAGCTCCGGCAGTGTCACAGCTTATCAACATCTCA 443 36 100.0 37 .................................... TCGGCTCGCGGGCGCGACGATCTTGCGCGCGATGTAC 516 36 100.0 37 .................................... CGGGTACAAGCGGCAGATCGACTCGCGCATCGTGCCG 589 36 100.0 38 .................................... CGCAAGGGGTACGGGTGGCAGGCGTGCAAGCGGGGCGC 663 36 100.0 37 .................................... TGCGGTCCGTGCCCGACGGCCCCCACTCGTCGCCGAA 736 36 100.0 39 .................................... TCCTTGATCGCGGCCCGCACCAGCGGCGTGAGGGGCACG 811 36 100.0 36 .................................... GACCTGGTTTTCGCTGACCCGGACGAGTCGGCGGGA 883 36 100.0 36 .................................... CATCCTGAAGTGCGTCGGATCGACGTGGGATTGGGC 955 36 100.0 39 .................................... TACGCTCTCGTCCCCGCCGTTCTGCTCGCCCTCCTGACC 1030 36 100.0 37 .................................... CCCACCGATTCGGCGGCTTGTCGCCCCGCGCCTTGCG 1103 36 100.0 42 .................................... CGCGGCTCGGTACGGCATGGCACGGCTGAGCGGGGCATGGGC 1181 36 100.0 37 .................................... AATGAAAGTCCGGCCGTCGAGGATCGGGGTGAGCAGG 1254 36 100.0 38 .................................... GCCGTCGAGCGCTCGCTGGCGGCCGAGATCGCGAGCCG 1328 36 100.0 38 .................................... CAGGTTTTGGGCCTCGTCGCCGATAACGATTTGCGGTC 1402 36 100.0 35 .................................... TTGGTACGGAACGCATTTCAGCGGAGGCTTGTAGT 1473 36 100.0 36 .................................... ACGTTAAGGCATCATCAACGTCCTCAACGGCTCTCG 1545 36 100.0 38 .................................... CTCAGTGTTGAGGTTCACATCCGGGACGGCCCCGACGC 1619 36 100.0 37 .................................... CGGCGTAGATCGCCGGGTCGTCACTGCACCCCCGCGC 1692 36 100.0 36 .................................... GGTGCTGGACCGGCTTGACGAGGTCGTGGGAACGGC 1764 36 100.0 36 .................................... CCGACGATCGCCCATCACGCAAACGACGTGCTGCTT 1836 36 100.0 38 .................................... GCGCCGCCCGGCGTGGGCGAGCGGCGGAAGCGCGGGGA 1910 36 100.0 37 .................................... AGGAGCACGTGTGGGTCGCGGGCAACCTCGACTTCGC 1983 36 97.2 37 ..........A......................... TGCCCAGGTTGCGGTACAGCGGGTGCGGATCACGGTA 2056 36 100.0 37 .................................... GCCGCCGACGATCGATACAGCCCTGGACAAGGTAGCA 2129 36 100.0 36 .................................... CGACGCCCTCGGGAAGCTCGCGAACTACCTGGGGCT 2201 36 100.0 37 .................................... GCGGCAAAATCGAGATGCTGAGTGCGGACGGGGTGTC 2274 36 100.0 36 .................................... CTCCTCCGGCTTCACGCCGCTCGCGCTCCCAATACT 2346 36 100.0 37 .................................... CGCTGGCGCCCGTGACGCGGCGCTTCGAGGACATCGT 2419 36 100.0 36 .................................... GGTCAGGCTGGGCACCGCCGGGGGCAGCGCGGTCGG 2491 36 100.0 36 .................................... CCTCCGAAGCCGGTCAAGCCCGCGGCGCCACCGCCG 2563 36 100.0 42 .................................... GGTGAGCGGGGTGCGCCACCACGGCTGGCCCGCGTTCCGCAT 2641 36 100.0 36 .................................... GGGCTGGTGCAGGGGTTCGCGCCGCCCACGCAGCAG 2713 36 100.0 37 .................................... CGGGCTGGTGCAGGGGTTCGCGCCGCCCACGCAGCAG 2786 36 100.0 36 .................................... GGAGGCGCGGCGGCTCACCGGCATCGAGCGGTACGG 2858 36 100.0 36 .................................... CCGTTCCTCGCGCAGCACGCGGTGAAAGTGCTCGTG 2930 36 100.0 36 .................................... GCCGATGGTGGCCTGAAAATCGCGCATGGCCTGTCC 3002 36 100.0 36 .................................... GGGGCCGTTCGCGTGCCCACTGAACGAGTGCGAGGA 3074 36 100.0 36 .................................... GTCGGTGAGCGAGGCGATGTCGCGCGGCGTGAGGCC 3146 36 100.0 36 .................................... AGGGCCGGACGGGGAACGTCCCCGCTCCGGGTATCA 3218 36 100.0 36 .................................... CTCGTGTTCGTAAAGCAGGGCGGCTTGGCGGTTGGT 3290 36 100.0 37 .................................... GCCGCGGCCCGCCGAGTGGCTCGCGGTGGTGCCGGTG 3363 36 100.0 38 .................................... CGCGGCCGGGTGGGAACGCGGCGTACATCGAGCACCTG 3437 36 100.0 38 .................................... GCGATGGTCTCAAGATGCTTGCAACGACGGTGCGACTG 3511 36 100.0 37 .................................... TGCTGTCCCCGCGCCCGGTGCGGATGGTCCAGTCCGT 3584 36 100.0 36 .................................... CCCCGGGCACGCTGTTCTCGTTCTGGGGCGGTGGCG 3656 36 100.0 37 .................................... TCCATCCCAGTGCAACGCCAATCGCGACGCCCGCGGC 3729 36 100.0 36 .................................... GCTGGCCCCAGGTTGCCCCGTGGCGTGCCACGAACT 3801 36 100.0 37 .................................... CGGCAAGCCGCTGACCCAGCCGTTCGACCCAACGACG 3874 36 100.0 37 .................................... ACCCGTCCAACAGTTCGGCGGCCTTGCGAATGTGCCC 3947 36 100.0 38 .................................... GACGAGGCGGCGGTGGAGATGTTCGCGGACAAGGTGCT 4021 36 100.0 37 .................................... GACGGTCAACAGCGACCCGGGCCCGGCGAATTCGTAG 4094 36 100.0 35 .................................... TCGAAGTTGGCGCCCAGGGCCTGGGGTGCGGCCGT 4165 36 100.0 36 .................................... CCAGAGCGCGAACACGTTCGAGGTCCGCAACAGTTC 4237 36 100.0 36 .................................... CTGACGCTCCCTGAGGTGTCGAGTTTCCGCCGCGGC 4309 36 100.0 38 .................................... TTCATCCTGCGCGAAGCGGGCGACAGCAAACGATGCCC 4383 36 100.0 36 .................................... GGTGGCGGTGGGTACGAAGTGGAAGATCTGGCTAGA 4455 36 100.0 38 .................................... GTGGCAGCCCCAATAAACCCTCGCTGCATGGCTGCGTG 4529 36 100.0 42 .................................... CCCTCGGGACCGCCGGCAGTTTCGGCACCGCTGCGCTGCACC 4607 36 100.0 36 .................................... CGAGGCGGGCCGGGTCGAGGACCGCGAGGAGCTGAC 4679 36 100.0 36 .................................... GCGAACGATCCATGTCATCATGTCCGCAGTGTCGTC 4751 36 100.0 35 .................................... CTTGCACGGGACATTCGGCCATTAACACACCACTG 4822 36 100.0 35 .................................... TTCGCTGCGTTACAAACTTGGTTTGACGTCCGGCT 4893 36 100.0 36 .................................... ACGATCGCACCGTTCAAAACGCGCTTTCGAAGGCCC 4965 36 100.0 35 .................................... ATCGAACTGAACCCTGCGTATCACGAACTGATTCG 5036 36 100.0 36 .................................... GCCGGTGCGGTTTGCGGCCTCAGAGAGCGGCCCCAG 5108 36 100.0 36 .................................... CAACGCCCAGGTGCGGATCGGGGTGCTGATGGCCAA 5180 36 100.0 38 .................................... CACAACGCCCAGGTGCGGATCGGGGTGCTGATGGCCAA 5254 36 100.0 35 .................................... AGGGGTTGAACTGATTTGGATGGTCATTAATCGCG 5325 36 100.0 35 .................................... ATGGTGCGCCTGCCGGAGGCGTACCGGGACAGGCT 5396 36 100.0 36 .................................... CGGGCGGACGCGCGGCACGCCGCGCGGCAATGGATG 5468 36 100.0 36 .................................... GAGCGTCACGTCCTGGTGAGCGCCGGCGATCGCCTG 5540 36 100.0 34 .................................... AAGGCGGTTCCGCCGGGGACCACGGGCCGCGCAT 5610 36 100.0 35 .................................... CGCGGGGCTCTCACGTGGCCGATCCCGTCAGCGCC 5681 36 100.0 37 .................................... TTAACTGAATCCAATCATTAGGGAGAGCGTGCGGGAG 5754 36 100.0 38 .................................... CCGGGGTACGCGCCGTCGTCGTCCGCGAAGTAGTCCGC 5828 36 100.0 35 .................................... AAAGATTCGTTCGCGATCAAATCGCACCGCCTGAT 5899 36 100.0 35 .................................... CCGCCCACCTCGGAGACTCCCGCGTGACCCGCGAC 5970 36 100.0 37 .................................... GCCCGTTCCCGCGTCGCCGATGCCGGCCCCCGCGCCG 6043 36 100.0 38 .................................... GTCTTTCAGGCTCATGCGGACATCCTGAAAGTGCAGTG 6117 36 100.0 36 .................................... ATCCGTAGACGTAAATAAAGATCAGGTCGCGGCCCG 6189 36 100.0 38 .................................... TCGATCTCGACGCGGCGGACGGCACCGCGGAGTTCGCA 6263 36 100.0 37 .................................... TCCGCTGGGTCAAGACCGGCACCGAGCAGGGGGCCGA 6336 36 100.0 39 .................................... CCCGGCGGGGAACGTGGTCCGCATTGAGGTGCGGTGGAT 6411 36 100.0 36 .................................... TCGTAAGCGGCCCACTGCTCTCGCGCTGCCGCCACC 6483 36 100.0 37 .................................... CCGACACCGACCGGCTGCGGTCGCTGCTGAGCGACCT 6556 36 100.0 37 .................................... GCGCCCACCAGTGCCCGGCCTACTTCGATCCGAGAGC 6629 36 100.0 37 .................................... CTGGCTGTGTGCCGGTCTGAGCGACTCCCCACCGCAC 6702 36 100.0 36 .................................... GCAACCGGGTCGGTGAACGTGGCGGCATGAGCAACC 6774 36 100.0 37 .................................... GGCTACATTGGTTGTCGAATTAGTGCCGTTCTTTAAG 6847 36 100.0 35 .................................... CCGCGCTCCAACGGTAGCACTGTTCGAGCCCGCGT 6918 36 100.0 36 .................................... CGGGCTGCTGGTGCTGCGAACCTCGGGCCAGGTGGT 6990 36 100.0 36 .................................... TTCCGGTGACCGCCCGAGCTATTACGTTTCCATCAT 7062 36 100.0 36 .................................... CTTCCGGTCGAGAACGCCCCCGCCGCTCCTACCGCG 7134 36 100.0 36 .................................... AACCTCATCTCGCGCATCAACGCCTCACCCGAATCG 7206 36 100.0 36 .................................... GCGGGGGTGGACGCGGGCGGAGATACGGAAGCGGGT 7278 36 100.0 38 .................................... TCCAGCGACCCCGCCATCTCAGCGCCCCGTGAGTGAGT 7352 36 100.0 37 .................................... CCGTCACAGGCGCGGGCGAACGAATGTACGCCCCGGG 7425 36 100.0 38 .................................... CCGGGTGGTCCAGGGGTACCGCCCGAACGGCGGGGCCT 7499 36 100.0 37 .................................... TTCAGAAGCTCCTTACTGCCGTCCTCGTACTTGGAGC 7572 36 100.0 34 .................................... TACAACTTCTGGGCGGAAATCCGCGGAGTTCTGT 7642 36 100.0 49 .................................... TCATCGCGGCCCTGGCCCGGGTGTACGGCCACGCGCACGGGACGGTCGA 7727 36 100.0 36 .................................... GGCGCGGAGCAGGTTCAGCTCCACTTCCGTGCGGTA 7799 36 100.0 35 .................................... GCGGCGCTGGTGGACGCGGCCGGGTCGCACGTCTG 7870 36 100.0 38 .................................... TTCTCCGCGGGACTCATGCCGGCGAGCCGGAAGCCGAA 7944 36 100.0 35 .................................... GCTGCCGGGCGAAGACAGCCAGACCGCTTTTGGCC 8015 36 100.0 35 .................................... CGCGCGACTCGCAAACCCCGGCGTGCCGGACTGCG 8086 36 100.0 37 .................................... GCGACACCTCGGGGTAGTCGGCCGCGAGAAGCTCGTT 8159 36 100.0 35 .................................... ACGTCCGTCTGAGGTGCGACATGCCCGCGTACATC 8230 36 100.0 38 .................................... TCGATCGCGGTGTCGTGGGCCGAGGAGAAGGCGAGCCG 8304 36 100.0 37 .................................... CACCTCGCCCGCGTACCGCGAGTGGCAGGCGAAGGCG 8377 36 100.0 39 .................................... CAGGACACCACCGTCAACGAGCTGTGCAAGCGGTACATG 8452 36 100.0 40 .................................... TGCGAGCCTGCGCTGAGGGCGAGACGGTGACGATCACCGG 8528 36 100.0 36 .................................... CCGCACGAGCACCTGCGCGGTGGCAACGGGGATGTC 8600 36 100.0 36 .................................... GACCGACGCGCAGAAGGCGGCCCTCCGCGCCCACCT 8672 36 100.0 36 .................................... GTCAGCCACCCCGTGCCCCCGGCGGCGGTACATCAG 8744 36 100.0 39 .................................... CGCGGGCGTTCGGTCGCCGGGGTTGTCCCCGCACGCGGC 8819 36 100.0 37 .................................... AACCAAGGAGACGGAGATGCCCCGGAATACGGACGTG 8892 36 100.0 36 .................................... ATGGGCTCTCGACCGCGATTCGTGCAAATGCTGCGT 8964 36 100.0 36 .................................... GCCGTCGTCGGTGTGGGCTGGGTAGGAACCCCGGTG 9036 36 100.0 39 .................................... CCTCGGCCCCGGGCCATCGTGTGCGACCACGACGAGGAG 9111 36 100.0 36 .................................... TTCGCCCGCTTCCGCTTGGCCCGCGGGGGTGTCCGC 9183 36 100.0 36 .................................... TCGACGGCGCTGTTCCAGATCACCCTGCTCGGTCTG 9255 36 100.0 37 .................................... CGCCGCCCCAGTTGGTCACGTCGGGGGAGCCGGACTT 9328 36 100.0 35 .................................... GCCGGCAGTCCGTTCGCCTGGGCAAGCCGCCGCAC 9399 36 100.0 36 .................................... CGTCAAGCCGGCGATCAAGCGGGCCGAGGCGATCCA 9471 36 100.0 36 .................................... GGCCGGTCTGTGCGTTGACGAGCAATGCCATGGACG 9543 36 100.0 37 .................................... GGCTCGGTCTTGGGCAGAGGCTAACGGGCACGAATTC 9616 36 100.0 40 .................................... CCCATCCAGTGAGAAGTCGTCCGCATTAAACTCTTCGCTG 9692 36 100.0 38 .................................... TCTGCAAGTCAGCGTCAGGTATGACCAGAACTTCACAC 9766 36 100.0 35 .................................... GCCGTCTCTGAAGTAGGGTGAGATCCACACTTCCC 9837 36 100.0 36 .................................... ACGGGGCCAGGATCTGTGACAGCTCCTCGGCGCTGG 9909 36 100.0 35 .................................... CACATCCCCGCCCGCACGCTGGTGGTGAGCGACCT 9980 36 100.0 36 .................................... GACCAGTGCGGAATACCAGTTCGACCACCGGCAGCG 10052 36 100.0 35 .................................... CCGGGCCGCTGATCCAGGCCGCGGCCGAATTGACC 10123 36 100.0 38 .................................... CCGCGCGTTGGCGTTGGGGCTGGCTGGCGTCAGGGTCA 10197 36 100.0 38 .................................... CATCACTTGCCCTCACGGATGGCCTTGCGGTAAAGCTG 10271 36 100.0 35 .................................... ATCGGCCGCACGTGCCGGCCGCTCGGGGGCAGGCT 10342 36 100.0 52 .................................... TTCTGAGGCGGCGCCGTGTACCGCGGAATACGTGTGCGCAGTTGCGAATTGG 10430 36 100.0 38 .................................... CCGTGCGGTGAAACTCCAAACCTGTCAGACGAGCCGTG 10504 36 100.0 35 .................................... GTGACCGCGACTCAAACCAAAGCGGCCGCATACAG 10575 36 100.0 36 .................................... GAAACGCTATACACAATCGCTCAACGCGAGCAGACG 10647 36 100.0 36 .................................... GCGGTTCCGGGCAAGGGCCAGTTTACGCCGTTCGTG 10719 36 100.0 38 .................................... ATCGCCAGCCGCCACAGGCCCGCTTCGCACGTCAGTGT 10793 36 100.0 39 .................................... CTGGCAGCGGGCCTGCAAGGCGGCCCACCCGGGTGCGAA 10868 36 100.0 37 .................................... CTGTGCCGTCCGGTGTAGTGCCTGCGGTTAAGTCAGA 10941 36 100.0 36 .................................... TAGAGCCGGGTATTAGCATCACCACCAAACCAAGTA 11013 36 100.0 36 .................................... AGCCGAGCTAGCTGCTGGCCGCGCAAGAACCTTTAA 11085 36 100.0 36 .................................... CTGTTCAACGTCTTTAGGGCAGCGAGCTATGGGAGA 11157 36 100.0 36 .................................... GGTTGCACGGCTACCCTGCACACATGGCCAAGTCGA 11229 36 100.0 37 .................................... AAGCCGACTCGTGGCGGACGGACCTGGGGCACAAGCC 11302 36 100.0 36 .................................... GTACTGCCCCCGCGGAAAGCCTTCTAGCTCGGTGAG 11374 36 100.0 39 .................................... CCCTTCTCGGTCACGGCGGCCCGCGCGGCCGTGTTGACC 11449 36 100.0 40 .................................... ACCCGTCCGGGCTCGCCTCGAACGTCACCGCGAGGCTCGT 11525 36 100.0 36 .................................... CCCCGACTACCTCGCGGGCGTGCTGATGGGCAAGCA 11597 36 100.0 41 .................................... CGGCTGCGGGTGGCGGTGGGGGCGTACAACCAGACGCACGC 11674 36 100.0 35 .................................... GCCCGCGAGCTGCTCAGCGGCACGGCCGCCAACGG 11745 36 100.0 36 .................................... CTGTTGGAGAGCTTCCTTTTCCTTGGCCGTGCCTTG 11817 36 100.0 34 .................................... AAGTGCTTCGAGTTATTCGGACGCAGTCTTCGCT 11887 36 100.0 37 .................................... GTAGTGGTCAAGGGCGTCGAGACTGTCGCGGCGGCCA 11960 36 100.0 36 .................................... GAGGAAGAGGACGACGAAGAGGAAGCAACTAAGGTC 12032 36 100.0 37 .................................... CCGAAATATCGAATTTGCGGTTTACACCGCAGAGTGT 12105 36 100.0 36 .................................... CCGATCGACGGTAAGTTTGTCATAATACCAGTTGAC 12177 36 100.0 37 .................................... ACGGCGGTAGTGGAATAAACGTGTGCGATCGCTGGCT 12250 36 100.0 38 .................................... AAGGCCACCGCTGCCGCTTGACCCGTGGCGATTTGATT 12324 36 100.0 37 .................................... GCATCGGTCTTCTGACGAACTTCGACTTGATCCTTCA 12397 36 100.0 38 .................................... TGCATCAGGGCGGTAGTCATTTTGTCGAGACAACGCTG 12471 36 100.0 40 .................................... TCGTGCTGTTCTACGAGAAGTGGCCGATGAATGGTGGCGA 12547 36 100.0 36 .................................... GCTCGTCCCCGGTATTCAGAAGTTGGTGGACGAAGG 12619 36 100.0 38 .................................... GCCGAGGGATTCCAACTCGCGTAGTCAAGGTAGAAGTT 12693 36 100.0 36 .................................... TCATTGTCTTCAACTTGAATGTACGTTGGCACTGCG 12765 36 100.0 34 .................................... TCAGCCGTCGCAGGGCTGACAGTCTCGCCGCCCG 12835 36 100.0 36 .................................... CGGAATCCGCGCGACCGGTGCCGGTATAACCGTCAG 12907 36 100.0 36 .................................... GTTATCGTCAAAGATCGCATAACCAGTGCCCAACTT 12979 36 100.0 36 .................................... GGCAGGAACCGAAGTTCCTGCCTTGCAAATTTCAAT 13051 36 100.0 37 .................................... CCTTCACGAAACGGGTGCTGAATGGGCAGCACCCGCT 13124 36 100.0 38 .................................... CTGCTCGATGCGGATGAGTACACGGTGGAGCCGCTGGA 13198 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================================== ================== 182 36 100.0 37 GCTTCAATTCGGCCGCGGCTATGAGCCGCGGAGAAC # Left flank : TCCGCGTTG # Right flank : CTTCGATTCTCAGAAATTATATCGTCGCAACGGATTATCGCAATCTCCGCGAGCGGTTGAGCGCGAAACGCTGTCATGACGTAAACTCTGGGACACCAGTTGCCACAACCCGCTGACCAAACCGTCGGTTGCGACTTGCGAGCGGTGGCGAACTGGCGCCCGGTGGAAACTCGTTAGTTGTCAAAGACCTTCGGCGCGAAACGCCCGACGACGCGTTTCACCACCGGGCCGCTCGCGTGTCAGATCACCCGGTCAGGCCGGGCAGGTTCGGCGTCTTGCCGACCAGAATGCGCGAGGTCCGGAACACCGAAGTGACCCTGAACCCGCGGAGCAGATCGGCCTCCCAGGATTCGGTCTGGAGGCCCCGCAGGGACAGCATTGAGGCCGCCCCGTCGGCTGTCAAGCACGAATCCCACAGCGGCCACAGCCAGAACGTACTCGCCGCGCGGTTGCCCCGGAACCCGCGGGGTGCGCACGCGGTCCCCGTCCGGGAACGACGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATTCGGCCGCGGCTATGAGCCGCGGAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-15.50,-14.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [5.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA // Array 2 2153723-2161082 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025958.1 Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================= ================== 2153723 36 100.0 36 .................................... AAGACGCTCCCGACTGCGGCCCTGTCGCTTCACCCC 2153795 36 100.0 35 .................................... ACTTGGAAACAGCGCAGGTCGTCATCGACCTGCGC 2153866 36 100.0 35 .................................... GCCGTCTTCACGATCGCGGGCACGTCGGCCGTGGT 2153937 36 100.0 35 .................................... CACACCGCCGCGACCACACTCACCGTGCCGGGGAT 2154008 36 100.0 36 .................................... TTGGTGCCGGCCTCGAACTGCGTCACGAACCCGAGC 2154080 36 100.0 35 .................................... GCCGAGTTGTTCGGCCGCTTCGACTTGGCTGACCT 2154151 36 100.0 37 .................................... CCCTCCACGGCGGTGGCGTCAGCCCCGCTGGTCGTGT 2154224 36 100.0 35 .................................... TCGAGCGGGGTCGGAAGTGCGCCGCCGATCAGAAC 2154295 36 100.0 37 .................................... TGCGGCGCGCCGACGCTGTGTGCGCCCAGAACACAAG 2154368 36 100.0 35 .................................... TCCGGGTCCGTGCCCGGAACGCCCAACTCGCATAC 2154439 36 100.0 37 .................................... ACCTGTACAGCGTGCGGCATCGGCCCCGCAGAGCCGT 2154512 36 100.0 34 .................................... AACGTGAAGGGCAAGCTACTCACGTGCGTAACGT 2154582 36 100.0 35 .................................... AGCCGGCCCTTGTACCCGGACCCGCTGTCGGACCC 2154653 36 100.0 35 .................................... GGCCGCGACCGGCGCCACGTCGCCCAGTGACGCAC 2154724 36 100.0 35 .................................... TTCCCGATCACGTCCGCCAAGCTCGCCACCCGGTT 2154795 36 100.0 38 .................................... AGTAACTGGGTATCAATCGTCACCACCGAAGGCCCCGC 2154869 36 100.0 38 .................................... TTCCGGGGCTTGCGGGCACGGGGCTCAAAGTCGAAGGT 2154943 36 100.0 37 .................................... CTGCGTTCAAGCAGCACATTACCCGTGTGATGGGCGC 2155016 36 100.0 35 .................................... CTCCTCTGCGGTGTCCTCGTGCATCGCGTGTGCCT 2155087 36 100.0 36 .................................... ACCACGACCACGCAAGACATCTGGGCGGACGGCGCG 2155159 36 100.0 35 .................................... TTGTATGGCCGCGCAGAACAGGGGATGTCGTACCG 2155230 36 100.0 38 .................................... TTCGGGTAGGACGGCGCCCCGTCCTCGTCCTCGACGGT 2155304 36 100.0 36 .................................... TCGGCACCGACCGGAACCGCGCGCAGGGGCTCCGCG 2155376 36 100.0 34 .................................... ACGGGCCGGCTCTCGTACTTGGCGAAGTCGCGCT 2155446 36 100.0 35 .................................... ATGCACCAAATCGCTTTGGCCCGACCGCTATCCGG 2155517 36 100.0 36 .................................... CCACTTCGCCACGGCCAGCGCCCACGCGGTCGGCCG 2155589 36 100.0 35 .................................... GTAATAGTCCCAGCACTCCGAGCAGCCAAGATATT 2155660 36 100.0 35 .................................... AACAACATCCGCAAGCCCCTGCCCATCCCGGTCGT 2155731 36 100.0 37 .................................... CAAGCCCGGCTCGGACGACCCATCACCCTGAACGATC 2155804 36 100.0 34 .................................... TTATCCACGCCTGGAACTGGGTCGTGTCCTTGCC 2155874 36 100.0 35 .................................... ATATCTGACTGGTTGCCGAAAATGAAGATTAGGGT 2155945 36 100.0 36 .................................... TCCACTTGTTCTTGGTTGCAACTTCGAAGATTTGAT 2156017 36 100.0 36 .................................... GTGACCCCGTAGGTGGAATCTTGGGTGCTGTGGACC 2156089 36 100.0 36 .................................... GCGTCGAACATCCGGGTCTGGAACACGGTCGAGATC 2156161 36 100.0 34 .................................... AACTGGTCGAGCGGCGCCGGCACCGCGAACGCGC 2156231 36 100.0 38 .................................... GGCCTGAGTTGGCTAAACGGTGGAGTGGGGCGTGGGGT 2156305 36 100.0 36 .................................... CCGTCCCGGAACAGGATGCGGGGCACGCCCTCGTCG 2156377 36 100.0 34 .................................... TGGGGCCTGCTGTTGTGGCTCTCGCACCGCGGCG 2156447 36 100.0 35 .................................... TGTGCGCGGCGGAAGCGCGTACAAATTGTGTGCTC 2156518 36 100.0 36 .................................... GCGCGGTACTCCAGTCTAACCCTGAAGCGGGTGCGG 2156590 36 100.0 35 .................................... TGATTGTGGACCTGAGCAGCGTGGCGTCCGCAGGT 2156661 36 100.0 35 .................................... CTCTGCCCCGCCCGGGGAACGCGGCCGGTCGCCCA 2156732 36 100.0 47 .................................... GGCCCAAAGACTAGAAGCACGTCACAGCCCGGCCCGGGCGAAACCAG 2156815 36 100.0 35 .................................... ACCCGTTCTGGAGCACGCTGCGGCCCAAACACGAC 2156886 36 100.0 34 .................................... ACCAGCGCCAACGGACGGTGCGTGAGCCGGTGCA 2156956 36 100.0 38 .................................... TACAGCGCCGCCAGCGTCACCCCGCTCTGGGCGAGGCC 2157030 36 100.0 37 .................................... CCGGGGTTCTTCGCGGAGAAGATCGCGCGGCACCGCA 2157103 36 100.0 35 .................................... CGGTAGGCCGGCTGCTCGTCCGCCAGTGTGCCCCG 2157174 36 100.0 38 .................................... AGCGCCACCGAGCGGGAGAACGTGTGGGAGTGGTGGAC 2157248 36 100.0 33 .................................... AAAATGCTTTCCTTGCTACGCCGAATATGTCGG 2157317 36 100.0 36 .................................... GACGAGGCCGTGGCTCGGTACTATCGGGAACGCAAC 2157389 36 100.0 36 .................................... CAAGCGGGCGCGAGACTGACGCGGGCGCGGGCGCGG 2157461 36 100.0 33 .................................... GCCTGACGGGTCGAGCGGCGGTCGGACGCGAAT 2157530 36 100.0 36 .................................... ACCCACGAGACGCGGACGCAACGCCGCTACCCTGGT 2157602 36 100.0 35 .................................... GTGTCGCCGAGCTGGAATCGATCCTGGCCGCGGTG 2157673 36 100.0 37 .................................... GTGGCCCGCGCAAACGGGTCCGGGGGCGACTGCGCGC 2157746 36 100.0 35 .................................... GCGAGAGCGGAGGGCGGCGGAACCGTTGGCACCGT 2157817 36 100.0 34 .................................... ATAGCCTGAGCCCACTTAGGTAGATTGTTGATGT 2157887 36 100.0 35 .................................... TGCTCCCGATCCACCTGACAACGAGGCTCTCTGGT 2157958 36 100.0 36 .................................... CGGGACTACAATCGGTGGGCTTGGGTGGCGGTTGGT 2158030 36 100.0 35 .................................... ATAGCCAAGTGGACCGAGGATAAGAGGGCTCCCCT 2158101 36 100.0 35 .................................... ATACCCGTTCGATTTCACACTAACCTCGACCTGAT 2158172 36 100.0 36 .................................... CTGTGCCTGAACGGCAACAACGGCATACCGTCCGGA 2158244 36 100.0 35 .................................... CCCAAATGCCGCATCGCCAGGGCGAGCGCGGAGAC 2158315 36 100.0 34 .................................... AGCGCACCGCAGTGGTACGTGTTCCGCTGGGGCA 2158385 36 100.0 35 .................................... ACCGTAATATCAGACCGCGAGGGCAAGCCCGCGGC 2158456 36 100.0 34 .................................... GCAGTGATGGCGGACCGGTACGAGCGGGGGCAGG 2158526 36 100.0 38 .................................... GCTCGCCCGGCCAAACCTCACACCACCGCGGCAGTCCT 2158600 36 100.0 35 .................................... GAGCGGCTCGCGAAACTCGACTTCGCCGCGGTGGT 2158671 36 100.0 37 .................................... TGCCACGTTGCGGACGTTGCGGGAGGCATGCCCCGAT 2158744 36 100.0 34 .................................... CTTCGTATTCAAGGACGAGCGAAAGTACCACTGC 2158814 36 100.0 34 .................................... GCGGGGGCCGGTTTGTACTCGCGCGACGACGAGT 2158884 36 100.0 36 .................................... TCCGTCCCCCCGGCCGGGTATCCGGGGGCACCTGTG 2158956 36 100.0 35 .................................... ACGGTGCTGTGGGTCGACGGGTTCCGGGTCGGCAC 2159027 36 100.0 34 .................................... CGGGCCATGTTCCCGATGGAGCCCGGTACGAAGT 2159097 36 100.0 35 .................................... GCGTCATGTCGCGGTCGAGCGGGTCGTTGTACGGG 2159168 36 100.0 38 .................................... AACTGGAGGTCGTAGGTGCCCTGGTACGGGTCGGTCGC 2159242 36 100.0 36 .................................... GGCATGATCGCCCGCATCGTGGCCCCGCTCATCGCC 2159314 36 100.0 35 .................................... GACGCGGGCTACCACCCGGTCATCGCCCTGCCCCT 2159385 36 100.0 37 .................................... CTTCGCTCGGCGAAGCAGATCCGCGCGCTGGCGCCGT 2159458 36 100.0 35 .................................... CAGCGGGTGGTGAACGAGTACTACGGCATGTTCGT 2159529 36 100.0 36 .................................... GACTGGCAGGTGGGGCACTGCGAGGTGAAGCCCGAC 2159601 36 100.0 36 .................................... GCCCGCGACCGCGAATCGCTCACCCGGGGCGAGCGG 2159673 36 100.0 35 .................................... ACAGCCGAAGCGGCCCGCGTACGCGCGGCCCTGGA 2159744 36 100.0 34 .................................... GGCACACCGGACCCCATCGACAGCAGCCGATCCG 2159814 36 100.0 38 .................................... TCGTCTTCTTCGGGCTCTCGCGGCTCTTCCTCCTCGTC 2159888 36 100.0 36 .................................... CTTCCACTTGACGATAACTGCCGTCCGGCTGACGTT 2159960 36 100.0 35 .................................... TGGTGGCGAAGGCCCGGCAGGCGCGGGCCGAGGGG 2160031 36 100.0 36 .................................... TAGATCAGACGTGAAATGGGAAGTGCGAATTGAGGT 2160103 36 100.0 35 .................................... ATTCCGAGTTCGACCGCAACGACCCGCCGCACGCC 2160174 36 100.0 49 .................................... ATGGCGTCGTAGTGCGACTTGGCCTTCAGCACGGCGGTGCTGACGCCCT 2160259 36 100.0 36 .................................... ATGCAGGCGGCCATTCTGGACGAGTTGACCACAAAG 2160331 36 100.0 35 .................................... AAGCAGCGAATCATAGCGGGCACACAAACCCCGAT 2160402 36 100.0 37 .................................... CCGAGGCGGACCCGGCGGTCGGTCCGGAGTCGGTGCT 2160475 36 100.0 35 .................................... CCCGCGGCGCCGAGCGAGACGAGCTGCGGCGGGTC 2160546 36 100.0 36 .................................... AACTTGAGGTGCGGGTGGTCCCACACCAACTCCGGT 2160618 36 100.0 36 .................................... CGAACCCTGTGCCGGAGTCTGATCGCCCCCGCCGTT 2160690 36 100.0 35 .................................... TCGTCTCGTGCCGGGTGTTTCCTCTCCACATCCTT 2160761 36 100.0 35 .................................... TCCTGCCCGTGGCTGGAAACGGCACCTTCGATCAT 2160832 36 100.0 35 .................................... GCGGCGGTGGGTCAACGGAGGGCGCGGGCGTGACG 2160903 36 100.0 36 .................................... GGCTATTCGAAGGGCTGATGCAGTCCGACGGGCACG 2160975 36 100.0 36 .................................... TGACCGCGACGGCCCCGCCGAGCCGGTCTCAGCCCG 2161047 36 97.2 0 ......G............................. | ========== ====== ====== ====== ==================================== ================================================= ================== 103 36 100.0 36 GTGCAGACTTCAGTGACGCCGTGAGGCGTTGAGCAC # Left flank : GTGCGCCCGGCACATGGAGGGGTACGGGGAGCGGGTCCAGTACTCGGTGTTCCGCTGCTGGATGAGCCAGACGCAGGTGGAGCGGCTCCGCTGGGAGCTGACGCAGTTGCTCGCGTCCGAGGACGAGGTGATGCTGATCCCGCTGCCGCAGGCCAGCGTGGACGGGATCGTGGGCATCCACGGGTCGGACCGCCCGCCGGAGTGGACCGCGGAGCCGCCGCGGCACCGGATCGTGTGAGCGCGAGGCCAATAGAACCGAATCACGCACCCGCGTGTGTGTGCCGGGTTCCATCATGGGACCGATCCAAACCTGAGTTGCGGTCTGGGTTTAACGCTCTTTGACAACTCGCCGGGGTGCTTGACGGCCGTCTGGGCCTTAAAATCCGTGTGAAGCGTGCCGCGCGTGGTTGGTGTCGGTCGTGCGGTCACGATCGGAGCGGTGTGGTGCGTGAAAACGGTTGCCCGGCGCGGCCGATTTTGAGCATTTCGGTAAGTGAGCG # Right flank : CCCTATTGCGCGTTGCGTTGATTTCTTCACGCGTTGTGCAGACCACAATGCGTGAAGAAATCAACGCAACGCGCAAGTACTTGTTTAGCGCCCCGTGAGTTGGCGGGATGATTTCCTGCCCCCCCCCTGTGGCTACGATAGCAGGTCTTCCCGACCGAACGTGAACGCCGAGGCGATGGCGCACATGTCCCCGTCATCAATGATCTGGAACGTCAGCCCGACGAACTGGCGGACGCATTCGGGGACGCTCGGCGATCCCAGGGCTGCGGACACGGACTTGCCCCGTCGCAGTTCGGCCAGGAAGCCGTCGATCAGGGCGGTGCGGGCTTGGCAGCGGGTCATCGCCCGGTGGTACAACTCGAAGTGGCTGACGAACCCGCCCCGCCCGTCGTCGTCGCTCTCCTCAGCCAGCACGATCTCGTTGACGAGCCGACAGCCGAGCGGGTCGGCGGCGGGGAGCCACGGCACATCGGTGCAGCAGAGCCGCCGTTGGAGCGCCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCAGACTTCAGTGACGCCGTGAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.60,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 3 3811008-3811403 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025958.1 Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 3811008 29 100.0 31 ............................. TAGTCCCGGACCTGTTGCTCAGTCGCGAACC 3811068 29 100.0 33 ............................. ATCGACGGCGTGGCGGCGGTGCCCGCGATGTTC 3811130 29 100.0 32 ............................. AATACGTCGACTCTTTGTCGGAACAGCACCGC 3811191 29 100.0 34 ............................. GCCGCGAAGCTGCCGGCGGCGAAGCACGAGACGC 3811254 29 100.0 32 ............................. AGGGCGTCAGCACCAGCACCTTCCGCCTCTGG 3811315 29 96.6 32 ...........................A. GTGGTGGCGGACTGGAGCAGTACGCTGCTGGT 3811376 28 89.7 0 .......A.........-..T........ | ========== ====== ====== ====== ============================= ================================== ================== 7 29 98.0 32 GTGTTCCCCACGCTCGTGGGGGTGAACCG # Left flank : ATCCGCCTTGACCTCGTCGCAGAGCACGATGTCCGAGGCAAGGAACGCAAGCGAGTCCATGCGCTAGTACGGAATGAGTGCCGCCGAGGCGCTCGGGCCGTAGCAGGCGAGGAACAGGAAGGGGAACAGATACTTCATCATCGCCTCCGTGAGGGCCGTTAACAACTCCACAATGATGGTCCGGCCCTCACTGGTCAATGGCAACGACGGTCATTTACGCGTGGCGCCAAGGCCCACGCTCACCCCTCCAGCCCGGCCGCGCGGCGCCCGCACGCGATGCACGCAGCGGACCACGACTGCTCGGCGCGCTCGTGATTGGCCCACACCTTGACATCTCGGTCCGCGGAGCCGGTCCCGGTGTCTTCTTGGTCGGCCTCCAAGAGCGGGTAGATGTTCACGGGGCAGCCGCGCCGCCATGTGCAAACGGATTCGCGGTCCGCACCTTGGTCGAGGCACCCCCACAGGTCCGTGAGTCGCATCCGGACGACCGGATGGGAGGC # Right flank : GGCCAATGACACCTACGCCAAATGCGCTCTCGGGGCCGCAGCCTGAATGCCAAGCCCTGCGATTTTCGGTGGTGTCCTGTTCGTCTTGTATGCGGCTACTGATGCGTGGTAAGTAGTTACGCTGTTCGGTCGTGCTTTTCCCTCGCGCGTGTTGGGATCGGTCATGGACGATCTGAGTCGGTTCTGTTGCCGGAATGCGGATTGCCCGGACCACGGGAAGCGGGGGCACGGGAACCTAACGGTGCCGGCCCGATACGGCCCGAGCAACACCCGGGTGCTGCGGTGCTCCACGTGCAAGGCCCGGTTCTCGGAGCGCAAGGGCACGCCCTTGTACGGCACCCGGTTGTCGGCCCAGACGGTGACCGCGGTGCTGGCCCATGTGGCGGAGGGATCCGGCACCCGCAAGACGGCCCGATTGGTCGGGGTACATCGGGACACGGTCACCCGGTACATCCGTCAGGCCGGCGAGCAGGCCCAGCAACTCCACGACGAGTTGGTGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCTCGTGGGGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-11.70,-11.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 4365278-4365818 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025958.1 Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 4365278 37 78.4 35 G...C....A.A..CG.A..................T GGCGTGTGCGGAGTGTTACCGTGTAGCGAAGAAGC 4365350 37 89.2 35 .AC.............TT................... TACAGGTCATACGGTGCGTAGTCCCGTATCGGGGA 4365422 37 86.5 35 GG..........C...T.T.................. AGGCTCGAATTATGCCACGATCGAACGGCGAGCGG 4365494 37 86.5 34 T...........C.TG.A................... GTCCGCTGGTAGTCGTCGAGGATCGGGGGCGTCG 4365565 37 100.0 35 ..................................... AGCGACGTTTCGGAAGCGATTCGATCGTCACCAGC 4365637 37 91.9 37 ..............TG.A................... GGGTTGAAGCCGCTGGACGGGACGGCCGGGCTGACCG 4365711 37 89.2 34 AG..............A.G.................. GCCTTACTGGCGAGTCTGGTGCCGAAGCCGGGCC 4365782 37 83.8 0 G............GT.AG..................G | ========== ====== ====== ====== ===================================== ===================================== ================== 8 37 88.2 35 CCTCTCCACGGGTTGACCCCCGTGGCCGAATTGAAGC # Left flank : CCATCCACCGGACCGCGTGTTCGTGGTGCAAGACGCTGAACCGCGTGTACGCGAACGTGCCGACGTACTGTTACGAGTGCGGTCACCGCGGGGACGTGCCGATGGGCGACTGCGACTGCGAGGAGTGCCGGTATCGCACGTTCGCGGTGCGGGTGACGACGTGTTGCCCGCGGCACCCGCACCGCCCCGATCCGGGGTGCCCGATCTGCACCGCGAAGAACGCCACCAACTGAAGTGGTCGCGCGACCACTTCGCCCCCAACCCGGAGCCCACTGTGAGAATCAGCATCCCGCGTTTTCTGGTCCGTGCCCGCCGCGTCGCCCGCCAGGGATTGGGCGGTGCGATGTACGGGGCGATCGTCGCCCTGAGCGGTCTGTACGGGTTGTTCTCGGCCGCGTGTATCGCCACGTTCACGACGCTCGTCGCGCTCGTGTGCTGCGTGTTCGCACGGGAGTGATCCGGGCGGATCGGATGTTGCGGCGGATCGCAAGCGGGGGTAA # Right flank : GAAACCCATCCTACGGGTTCACGGGGTTTGTGGGAAGGAGCCCGCCGCCCCCCGTATCGCCAGAGCCCAACCCACCCGGAGGGCCGGCGAACGGAAACCCGCCGCCGATCGGGCCGGGGATGCCGAACAGGTCCAATTGCGACGGGGGCTCGACGGAAAGCGAGGGCTCGCGCTCAGGAACGAAGATGTTGCTTCCGTAGTCCCCCCCACCGCTGTACCCGGAGCCGCTGCTCCCGGTCCGGACAACGGGGGCCGTAAAGTTGGCGATGTTCGGTGCGGTGGTGAGCACGCCATCGCTGAAATATGGTGGCACCGGGGCCGTGAGTGACACCAATGACGGGTCCAACACGCCATAGATGTAGTGGCCGGCGACGCGATACGTCGGGGCGCTCCCGTCCGCGGAAAGCTGCATCTCGGCCGGGATGCACGTCCCGCCAATGGCAACGAGGTTCGGATCGTTCACGGAGAACGACGGGATCTGGGGCGGCCTGCCAGTTCTC # Questionable array : NO Score: 3.46 # Score Detail : 1:0, 2:3, 3:0, 4:0.41, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCTCCACGGGTTGACCCCCGTGGCCGAATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCATCCACGGCTTCCGAGCCGTGGCCCCATTGAAGC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [4-4] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 8998477-8998872 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025958.1 Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 8998477 36 100.0 35 .................................... GTGACGTGGGGCTCCATCTCCCGGCCACGATCCGC 8998548 36 100.0 36 .................................... CTTGTGGCTGAACTTCACGTTGGCTGCCAGCCACGG 8998620 36 100.0 36 .................................... TTCGCATGGCCGGGAGGACGCATGAGCAACGACGAC 8998692 36 100.0 35 .................................... GTGCTCCCGGAGCCCACCGGCCGGTGCTTCGCCAT 8998763 36 100.0 38 .................................... AAACACACCAGGGAAGGGGTGACGGTATGAGTTATCCG 8998837 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 6 36 100.0 36 GCTTCAATTCGGCCGCGGCTATGAGCCGCGGAGAAC # Left flank : CAACCTCCAACGCGACGACCTGCTCGGCCAGTAACCGCAGGCTCCAGTTGGCGAAGCCCTTGGGCGGCGGACCCAATCGCATCGCGATGACTTGGGCTTCCTGTTGGCCGTCGAGCAACTTGGCTCGCGGGGGCTCGGCCCGGGGTTGGCCGTGGAGTGCCACCTCGAACCCGCTCGTCACCACGCGCTCCCGGATATTCTCCACGGTCTTGGTGCGACATCCGACGGCCTCGGCAATCTTCGCATCCGTCCAGCCCGGGCCATCGGCATCGGCCTTCAGAAGAATCTGGGCCCGACGAACCTTCTGCGAGGATCCCTTGAGTTTCTTGACCACCTCCGACAACGTGGCCCGTTCCGCATCCGAAAGACGAACGATATACTTCTTCATCACGGCGGCACCTCACGGGGGGGGCTGCCATCATACCAATGGACCCCGTGGCATCCTAATTCGTTAGCCTGACACAGCACTAGGGCGACGGATAGCAAGGCGCGGCCGAGGA # Right flank : CTCGACCCGCACCCCCTCTTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATTCGGCCGCGGCTATGAGCCGCGGAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-15.50,-14.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [41.7-10.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA //