Array 1 225684-223670 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYDL01000003.1 Flavobacterium sp. RSP15 NODE_3_length_408478_cov_159.519232, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 225683 36 100.0 30 .................................... TTATAAAATATAACTACTTATGCCTGACAT 225617 36 100.0 30 .................................... TTGGTAAGATTAGAAGCCGTTAGCGTGACG 225551 36 100.0 30 .................................... ACCGCCTCGATAACAGGGGCGGTTTTAAAC 225485 36 100.0 30 .................................... ACACGGAAAAGAATTATCAATGACTAATGA 225419 36 100.0 30 .................................... TGGTGTGTCTTCTTCGGTTTTCATCCATTT 225353 36 100.0 30 .................................... TTTGAATTCTTTTTCAATAAGATCCAATCC 225287 36 100.0 30 .................................... AAATGCTAGTAATAAAACTATAGAAAAATG 225221 36 100.0 30 .................................... AAAGAAATCGCAAAACATTTAAACACAATA 225155 36 100.0 30 .................................... CAAAAGCTTACAGCGAGGATGTGACTGAAG 225089 36 100.0 30 .................................... GTATTGCTACAATTTTGGCGTGGCAGGACA 225023 36 100.0 30 .................................... TTAATTAATTTAGCACCAAAGCCAGCGTTG 224957 36 100.0 30 .................................... TTTTTTGATTGCGTTTTCTGATTAAGAATT 224891 36 100.0 30 .................................... AAGGGCAAAGTAATATCCAGAATGCCACCG 224825 36 100.0 30 .................................... ATTCCCCCCAACTGCATTTCTATCGTCGTA 224759 36 100.0 30 .................................... AAATGTATATTGAAAACATTAGTGAATTTG 224693 36 100.0 30 .................................... ACTTTTGCTATTCGCATCATGCGGAACTCG 224627 36 100.0 30 .................................... TTGGAACTTTTAGAAGTTTGACAGGAAGCG 224561 36 100.0 30 .................................... ACACTTCCGGAACTTCACAACCTTCAACTA 224495 36 100.0 30 .................................... GCTTTGCTATACACTTGCCACGGGAGGCGG 224429 36 100.0 30 .................................... CGCTTGTGCCATTTGAATGATTGTGTTTGT 224363 36 100.0 30 .................................... GCTGGATTCGAATATTCTTTTGATGGATCC 224297 36 100.0 29 .................................... ATTTTTATTTTTAACAACCTTAACGTTTT 224232 36 100.0 30 .................................... TTTATTTATTTCAAGCCGAAATCATACTAG 224166 36 100.0 30 .................................... GAAAGCCTTATAATCAAGTAAGCGAGGAAG 224100 36 100.0 30 .................................... GAGCAACTCCATGCAACGTACATCCTCCAC 224034 36 100.0 30 .................................... GAATGTGCATTCATGTTGAAAGAAAAGATC 223968 36 100.0 30 .................................... CTTTTCCGTATCGGCAGTTTTTAACGGATA 223902 36 100.0 30 .................................... ATTTTTAACCTCGTCTAAAGTTTCTAATAC 223836 36 100.0 29 .................................... ATTCTTTCAACAAAGAAGATTGTTGCTGT 223771 36 100.0 30 .................................... AGTAAAAACAAATACAAAAAATTATAACCT 223705 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 31 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : TATCTAATCAAGCAAGCACGTGAGCGGGAAGAATATCACAACTATGTACAAATGAAAATCGATAGAGGTTTGAAAAGTGGTTTTAGCACCAAAACCAAAGAGGAACTTTTGGCAGAAATTAAAAGTAGGCTAAATGTATAAGTATCATTTATCTTACGAAGCTGAAGAGGATATTGTAAGAATTTTTGAGTACGGTTTAGGAAGATTTGGTTTGTAACAAGCAAATAAATATTACGATATATTGTTTGAATGTTTTAAAAACTGCATCAAATCCGTTTATGTTTCCAGTTGTTACAAAATACATGGATGTAAAACGTTTCTGTGTTTGTGGAATTGATTCCATTTATTACAATATCAAAGGTGTTGAAATTGAAATCATTACAATCATCGGAAGACAAGATTTTTAAAGGTTCTTTGACATACAGTTTTTCATTGTCTTAAACAGCCAAACCACAACTGAAAGGTATGGCATCCGCCCAGCAGGGATGCAGTAGCTTTCA # Right flank : AGTTGGCTTGTTACCTTCTAATTATCAAAGGAATATGGATGAATGTCGTATAAAAAAATGCCTCTTTTTTGGATTGATATCCCAATATTGAGGCATTTTTTTATTTCTATCAATAAAAATTCGATAAATGGTAGTAGAATCATAGTAAGAGGCAAGATTCAATGATTAATTTTTAGTGCAATCTGCAGGGACAGATCGCGACCTGTCCGTACGTTATCCAGATGCAATAGGTATTGGGGATTTTCCGCAAAATAATTTATATTTTTTACGATTTGTGTGCAAGATAGGAAATGTTGTTTTGGGAATGTGAATAGGGCAGGAATAGGGCAGGAATAGGGCAGGGACAGGTCGCGACCTGTCCGTATGTTAGAGATTAGTCGCAAAATAATTTATATTTTTTACGATTTGTGTGTAGGATAGGAAATGTTGTTTTGGGAATGTGAATAGGGCAGGAATAGGGCAGGGACAGGTCGCGACCTGTCCGTACGTTAGTNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //