Array 1 7885-5539 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMGH010000014.1 Lactobacillus mulieris isolate MGYG-HGUT-02313, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 7884 36 100.0 30 .................................... TAGTATTATTAATCTATAAGCTTAACAAGG 7818 36 100.0 30 .................................... TTTAATCATTTTAATGATTCCGTCGTCCAA 7752 36 100.0 30 .................................... AGTTTTGGAAAAAATAGGAGGTTTAAACTA 7686 36 100.0 30 .................................... TTGGTTCGAAAAACGTTTTGCAACGTTATA 7620 36 100.0 30 .................................... TTGATTGACTCCACTCGTTTGCCCAGACGC 7554 36 100.0 30 .................................... CTTTCAAACCTCTTTTAGCCTGTGGAAGAT 7488 36 100.0 30 .................................... CTCAGATGAAGAAGACAAAGACAAGAATGC 7422 36 100.0 30 .................................... AAAGTGGAATTTCAGTTGGACTCTTTACAT 7356 36 100.0 30 .................................... ATACCGTGGAGATTTGATTAACTGGTATAC 7290 36 100.0 30 .................................... TTCCTTTATTTAGCATCGAAGCCCTCAGAT 7224 36 100.0 30 .................................... ATCATACGTGAAATCAAGAAGTAGAGAGGC 7158 36 100.0 30 .................................... GAGTAGCCTGCTTAGTGCAATCACTGTATC 7092 36 100.0 30 .................................... CTTATTGTGCTTTTTGAAGTAGTCAGCATC 7026 36 100.0 30 .................................... AGGTGTTTTCCCAGAATTAGACCTTGATGA 6960 36 100.0 30 .................................... TGTCATGTAAGCACCGTGCTTTCTGATAGC 6894 36 100.0 30 .................................... TGGACATATTGTTGCTTTTAAAGCTGATAT 6828 36 100.0 30 .................................... AGACGGTGTAATTGCTAGTTGTGAAGAGGT 6762 36 100.0 30 .................................... TAGAATATCGTCCTTGTTGCTTTGGTTTAA 6696 36 100.0 30 .................................... TCGTTTTAGCTCTTTCAGGTAGTAACTCAT 6630 36 100.0 30 .................................... AGAATACATACGGCTCATCAATAATAGAAA 6564 36 100.0 30 .................................... ACTAGCAAAAGAATTTACTACTATCACTAT 6498 36 100.0 30 .................................... TTCATCTACTATGAAAAGCTTTGCTTCATA 6432 36 100.0 30 .................................... TAATAATGTAAGCTAATTAATAAGAAAACG 6366 36 100.0 30 .................................... AAGGTATTGATTTACCAGATATTATCGATA 6300 36 100.0 30 .................................... TTTCATTCTTTAAATCTTTCAAGCTAGTGA 6234 36 100.0 30 .................................... GAGTGTACTGTTGCAAACCTCGACTAGCAT 6168 36 100.0 30 .................................... AACGTACGGCTTAACTTACTGCTTAACTTA 6102 36 100.0 30 .................................... TGGAGCTGGTGGGTTCGGAGCAGGAGGCTC 6036 36 100.0 30 .................................... TTAACCGACAAGCGGAACCCAAAGAACAAC 5970 36 100.0 30 .................................... TCGTTTTAGCTCTTTCAGGTAGTAACTCAT 5904 36 100.0 30 .................................... AGAATACATACGGCTCATCAATAATAGAAA 5838 36 100.0 30 .................................... ACTAGCAAAAGAATTTACTACTATCACTAT 5772 36 100.0 30 .................................... TAATAATGTAAGCTAATTAATAAGAAAACG 5706 36 100.0 30 .................................... AGCGCCTAAAAGAGCTGCAGTAATTTCAAT 5640 36 100.0 30 .................................... TAAAAGTTGCTTTTTCTTTGATAAAGCCTG 5574 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 36 36 100.0 30 GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Left flank : CACAAGATTGTCTTAATTCTTATCTAACTAAAATTATTTCAAATTTATTTGAGAATATAAGTGAAAAGCATCGGAATAGAATATTTGATAAATGGAGGCAACTTAGCACCGATATTCAAGATATAATCTTTATGACTGACTTACCAATTGAAGTCAATGAAAATGTAGATTTAAAAAAGTTATTTAAATTTGATGGAATTCATTTTGATGATTCTGTACTAAGTGATCCTTATGCTATAATTGAAACAGTTGTTAAAATTCATATTGAATGTAAATTGAATTCGGTTGTTACTTTTGCAAATGTAAGTCATTATCTTACAAAAGAACAACTGAATAACTTAATTACCTTTGTAAAAGAAGTAAATGTACCTTTGATATTAATGGAATTTTCATCTCCGAATTTTAAGGTTGTTAGTGGGGATTCAAGAGTCTGTTATATTGATGAGGATTTTGTCGACTGGTACTGATTTACAATCTGAGAAGCTGATGATAAAACGTCG # Right flank : TGTTAAATTTAAAACTACGTATAACAAAAAGTTTTAGAAGGTTGTAAAACACTATAACTTATAGGAGATAAAAATGGAAGGTTTAGTATATGTTATTCTATTTATAGGAGCTTTTATATATTACTATTGTAAAAATAACCGTAAAAAATAATATGTTTTTAAAAGTTAGGAATTATCAATTTAACTCTGTATTGACTATAATTATTTTGAATGATAGCATAGCAAGAAGGGAGCTAAGCCTAGCTCCTAAAAAATTATTATTTAGTCATTTTATAAATTACTAATAGTTGAGTGATTATAATCAGTAATTTAATAACAATGTCTAAGCAGTCTTTTATAACGGCTATTCTATAGCCGTTTTTATTTTTGTGCTTTTTGTTTTAAAAGACTAGCGAATCCATGATTTAACGAACTCCGCTATTTGTATAGCGGAGTTATTTTTTCCTCTCAATTTAATACAAGTACCAAAGAACTTTGAAAATAATAGCAATTGGTCTATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //