Array 1 25584-26863 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB893991.1 Weizmannia acidiproducens DSM 23148 C232DRAFT_scaffold00016.16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 25584 32 100.0 33 ................................ AAGATTTGCTTCGGCTCTCGCCCTGCAGGTTTG 25649 32 100.0 34 ................................ CGTAACATCAACAGCCGTCAAACGTTGATATGAC 25715 32 100.0 34 ................................ ATTGATGAAGACACGGTTGTTGTAGCTCAGTATG 25781 32 100.0 33 ................................ CGTGCTGGCACTTGTTATGCGCGCCCAATGTTT 25846 32 100.0 35 ................................ AGTTCCGAATATTCCGGTTTGCACATTTAGTTTCA 25913 32 100.0 34 ................................ TTCTCTTGTCATTAATAACCGCCCTTTTGCCTTG 25979 32 100.0 33 ................................ TATCCATAAACACAGGAATTGCAGAAAATCTAT 26044 32 100.0 34 ................................ AGACAGTTGCTCTAGCCATTTATGTAAGTAAGGA 26110 32 100.0 35 ................................ AGCGTATTGCTCCCGGAAAGCACCTTGGAGCCTTT 26177 32 100.0 33 ................................ TGTGGAAAGAAATTGAACGTGACGATGAACTGA 26242 32 100.0 35 ................................ GCCGATAATCGCGGTAATCGTGCGGCAAGTTTGGG 26309 32 100.0 33 ................................ GCAACAAAGCTGTTCACCTTTTTAAATATTCCG 26374 32 100.0 35 ................................ GATAATTTCTCGAATAATGTCGTCAATATTTTTAA 26441 32 100.0 33 ................................ CGCTCATGCCGTAGTCCTTGGCGATTTTGGTAA 26506 32 100.0 33 ................................ CCGATTCGGTCAATAGACATCCACAAGATTTTA 26571 31 96.9 34 ..................-............. AAAAATATAAAAACCAGCGGCTAATCCAAGGTCA 26636 32 96.9 34 ...........................T.... CACTTTGTCCCATGAGATTGAACTGAAACTTCAA 26702 32 96.9 33 ...........................T.... AATCATAGGGAAAAATGTGTCATTCACCTTTGT 26767 31 87.5 34 ..............-....T.G.....T.... ATTTTGAATATGGTTTACATAAAGACCTGAAACA 26832 31 87.5 0 ......-..........A.T.......T.... | A [26846] ========== ====== ====== ====== ================================ =================================== ================== 20 32 98.3 34 GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTC # Right flank : TTAAAAAGTGCTGTAATGATTTCATCAATGTCAATACCGCCCTTCCATGAGGGACGAATTGAATTATTTGGGGAAATTTACTCCAAATAGTGTTTTTCGTCACTTCAAGTACGAGCGAATGAAATGAATTTTTATCATTTCCCGAGTATAACTCCACAGTGATATCGTAATCAATATGGGGTATTTAACATCTTAATAACTTATACAGTAAGAATAATCTATTTTTTATCTTCTTCTATCGTTCAAACAAAAAGAAAAATTGTAAAGCACAGGGTATTGTGCATCTTAACAAAAAAAGTCTGAGGCAAAAGCAAGGCTCACTTTACCCCCCACTGATCCTCAGGCTCGTCCAGCTCCAGCTTTTTCAGCTCTTGTTTCATCTTCTCGGTTTCCAATAGATAGTTTTCGTTCTTTAGCTTTTCAAGTTCAAGTTCTTTTTCCACAATTTGTAATTTGAGTTTTTCTCTGCCTTTTAAAAAGTTTGTGACGATCGCGATGAT # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.00,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 753-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB894012.1 Weizmannia acidiproducens DSM 23148 C232DRAFT_scaffold00037.37, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 752 32 100.0 33 ................................ CAAAACGTCCTCAAATACAAGCTTGTTGTTGTC 687 32 100.0 33 ................................ CCTGCTTTTATGATCTAATTAACCACATTTTTA 622 32 100.0 35 ................................ AGCGTATATTACGACATATGCACCGGTCATTATCC 555 32 100.0 33 ................................ CGGGCGTATGCCATGAAGGGTTACGACAAAAAC 490 32 100.0 33 ................................ AAAGAGGGTTTTTGTAGTAGAAAGTGAGATTGA 425 32 100.0 34 ................................ CTCAATGCAGCCGTCATATAATCGCTGGGGATCG 359 32 100.0 34 ................................ TAAAACGGAAGGAGACGACAAAACGAAATGAACC 293 32 100.0 34 ................................ AAAGTTTTTAACGAGGACTTTAATAAGGGCATGA 227 32 100.0 34 ................................ ACGTGTATTGGCATTGGCGTTGGCATCGTTTGCC 161 32 100.0 34 ................................ CTAGGACTTTAATTTGTTGTCCGGGATAAGTGCC 95 32 100.0 34 ................................ ATTTACGTTTAGGACACAACCAGATACAGCAAAA 29 29 90.6 0 .............................--- | ========== ====== ====== ====== ================================ =================================== ================== 12 32 99.2 34 GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : TCGCACTCCATGTGAGTGCGTGGATTGAAATGCGAACAAATAACGATAATTTACGCACTTTTTGCGTCGCACTCCATGTGAGTGCGTGGATTGAAATTCCATTTTTGTATTGTTTTTTTCCTTCCGTGGCTGTCGCACTCCATGTGAGTGCGTGGATTGAAATTAGGCAGAAAGAAATGTATATTCTAAGCATAGATGTCGCACTCCATGTGAGTGCGTGGATTGAAATTCATCCCATTAGTACAATTAAAAACACGTTAAAAGTCGCACTCCATGTGAGTGCGTGGATTGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : A # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1586-958 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB894012.1 Weizmannia acidiproducens DSM 23148 C232DRAFT_scaffold00037.37, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1585 32 100.0 37 ................................ AAAAAAGGAAGGGATTCTAATGGCCCCTTCCACCCCC 1516 32 100.0 33 ................................ CCTTCAAGCAACAAACTATACATGTTTCATAAC 1451 32 100.0 34 ................................ ACAGGATCCGGAAGGTAAATCATACATTGGAACC 1385 32 100.0 34 ................................ TATATTAAAGCCTCACGGGCTTAATACCAAAATC 1319 32 100.0 34 ................................ CAGACAATACTTTTTCAGTTGTATTGCCGTCCAG 1253 32 100.0 34 ................................ GCGAACAAATAACGATAATTTACGCACTTTTTGC 1187 32 100.0 34 ................................ TCCATTTTTGTATTGTTTTTTTCCTTCCGTGGCT 1121 32 100.0 34 ................................ TAGGCAGAAAGAAATGTATATTCTAAGCATAGAT 1055 32 100.0 34 ................................ TCATCCCATTAGTACAATTAAAAACACGTTAAAA 989 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 10 32 100.0 34 GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : GTGGGAATCGCTCGTTAACATGTGGGATCTGGATCATTCAGCATCACGCGGCCGGATGGCATGCCGGGGATTGTATGTATTTTCGCATGAAAGCCATTTAGGTAATGCGCCATCTAATCAATTGTTTGAGAAAATTGAAATCCATCGAATGGATCAAAATAAGGTTGCGAGATCATATAAAGATTATGAAGCTGTTTTTGATGAAAAAATGCCAGAAGGAGTAACACTGCATAAAATTGTGAATTCTTTTGAAAATACCAAAGTTACCCGCTGAGCTATTGATTTTAAGGAAATTATCTGTCTTGAAATGAGATTTTCTCAAGGTGCAACTGTGCGAATGTATAGTGCACATGAATCTTCTGAGGGGTTCGCACCAAAAATTTGACTCATTTTTACCATAGAGTAGGACATTTTGGATGTCCTACTCAGAATAATAGGAAAAAGTGCAAATATTCGTCAAAAGTCATTAAATTTCTACACGATTTTATCCAATAACCGCT # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCACTCCATGTGAGTGCGTGGATTGAAATCAAAACGTCCTCAAATACAAGCTTGTTGTTGTCGTCGCACTCCATGTGAGTGCGTGGATTGAAATCCTGCTTTTATGATCTAATTAACCACATTTTTAGTCGCACTCCATGTGAGTGCGTGGATTGAAATAGCGTATATTACGACATATGCACCGGTCATTATCCGTCGCACTCCATGTGAGTGCGTGGATTGAAATCGGGCGTATGCCATGAAGGGTTACGACAAAAACGTCGCACTCCATGTGAGTGCGTGGATTGAAATA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //