Array 1 151209-155077 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSXT01000001.1 Halomonas sp. 15WGF NODE_1_length_197087_cov_299.491894, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 151209 28 100.0 32 ............................ TCATTGGTGTGGGCGCTGACTGTGAGATGATG 151269 28 100.0 32 ............................ ATGATGGGCGGGCCAGCTCAGCGCAGCGAGAA 151329 28 100.0 32 ............................ TTCTGGAATCAGGATTGTCGCTTTGTCATCGC 151389 28 100.0 32 ............................ TCAGTAAAAGCTGCTGATGCGCCGGTAGCCTC 151449 28 100.0 32 ............................ TTTTAAGCGGCCAAATAGCTTCATGTTTAAAA 151509 28 100.0 32 ............................ GGTCACGATTAACCCGAACCGGCCCAATGCAC 151569 28 100.0 32 ............................ ACTGCAACATTTCCCGCCGCTCTTTTAGATAG 151629 28 100.0 33 ............................ CCGACGAACAGAAACGCGGCCCAGAGTAATTTG 151690 28 100.0 32 ............................ AAAGGCATGAAACGCATCTACATCAGCGGCCC 151750 28 100.0 32 ............................ AGCACCGCCCACGCCACGCCCATTCAAATGCA 151810 28 100.0 32 ............................ AAGAAGATCATGCGCATTGACGGCATCGACGA 151870 28 100.0 32 ............................ TCAAGCTGCTTTCTGCTATGGCGATCCTATTA 151930 28 100.0 32 ............................ ATGCGTAACCGGCCATTTCAGTACCGGCGGCT 151990 28 100.0 32 ............................ GAGGCCAGCACCCAGCGCGATGTCGCCGAGGC 152050 28 100.0 32 ............................ CTGCTGCAAGGGCGCGTTCGCGTAGGGTGTTT 152110 28 100.0 32 ............................ TAAGCCGGGCGCTGGGCACCACCTACGCCGCC 152170 28 100.0 32 ............................ TGCTCAAGCCCGTTCGGTGAGTAATCTAATTC 152230 28 100.0 32 ............................ ACACCGGCAGCCCGTTTTCACCCGCACCGGTA 152290 28 100.0 32 ............................ TAGATGGCTGGCCAGCGGCGGCGATTGCTGGC 152350 28 100.0 32 ............................ TAATGATCGACGCCATCATCTTTTGCCCATCA 152410 28 100.0 32 ............................ AGTGGTAGGTAGTTAGGCCAGCAGAGCGTTAG 152470 28 100.0 32 ............................ AACAGGTGCAGGCCACGAACCCATTTCAGGCA 152530 28 100.0 32 ............................ TGGTCGTAAATCCAAAGGTTGCCGCGCATGGC 152590 28 100.0 32 ............................ GACCGGCGCTATGCAGGCATGTCACGCAAACA 152650 28 100.0 32 ............................ TTGATGCGCAGATGCTGGACGTGCGGCCATCC 152710 28 100.0 32 ............................ TGGAACTGGACGACGAAAAGGCTGCCGCGCTC 152770 28 100.0 32 ............................ AAGCTGGGCGCCGCTCCACTCCACCAGTACGA 152830 28 100.0 32 ............................ GACTCGCCATCGTCATCTTCTGACCTGGTGGT 152890 28 100.0 32 ............................ ATTCCCAGACGTTGCCCACTAGATCAGCGATG 152950 28 100.0 32 ............................ AAGTCGGCAATGCCGTTGGCAGCGTTGTTGTG 153010 28 100.0 32 ............................ ATGGCAGTAACCCCGCAATACGTATCTGAATT 153070 28 100.0 32 ............................ TTGTACTCGAATAGCCCGCCGCGATAATCCCC 153130 28 100.0 32 ............................ TTACCGATCACTAAGATCGCCAGCCGCCAAAA 153190 28 100.0 32 ............................ TTCTTTTCCCGCAAGTAACCGTAGCGGTCATA 153250 28 100.0 32 ............................ ATGCTGATACCCGTACATAACGGCACCGCTGC 153310 28 100.0 32 ............................ TGCTAGGGTAGAGCGTTTCGCTCACCCCTTTC 153370 28 100.0 32 ............................ GTCGTAGGCGAGCAGCAGACGGCGCAGGTAGT 153430 28 100.0 32 ............................ TGTATGCCATCAAGATTAATGGACTGCCCGGT 153490 28 100.0 32 ............................ ATGCACGAATGGGCCGCCGTGGCGCTGTGGTG 153550 28 100.0 32 ............................ ACGATACGGGAACCGCTCGCCCTCGAGGTTGG 153610 28 100.0 32 ............................ TATCAGGCCCGCTTCGATGAGGCCTTCGACCT 153670 28 100.0 32 ............................ CAGATCCTCATAGCGGAACTTGGGAATCACGT 153730 28 100.0 32 ............................ GTTAACGAAACACTCCCCGCCATGTTTGAGGT 153790 28 100.0 32 ............................ GCGACCTCTTCGCGCTGGCTTTCGGGCATGGC 153850 28 100.0 32 ............................ TTCGCCGCTGGCTGGCAAGTCGCCCAGTGGCA 153910 28 100.0 32 ............................ TGTATGCCGTCAGCACCACAACGAGATTCACC 153970 28 100.0 32 ............................ CAACACCCTTAACTTCAACAAATGCATCCAAA 154030 28 100.0 32 ............................ TTGTGGACAGCTAGAACCACGGCTTCACGAAT 154090 28 100.0 32 ............................ TTGAACACCTTGCCTGTCTGACCTTCAGCAAG 154150 28 100.0 32 ............................ AAGCTATGGTGACGCAACTGATTCACGTACTC 154210 28 100.0 32 ............................ TATAACGCACACCGAGCAGACCACAAACCGGA 154270 28 100.0 32 ............................ AATACATGCAGCGCGTGGCGGCTGAGCGTGAC 154330 28 100.0 32 ............................ GCAACCTGAAGGCATCGACGCGGCGAAAGATC 154390 28 100.0 32 ............................ TGCTCGAGGGCGGGATCGTTTTCTTCTTCTCC 154450 28 100.0 32 ............................ AGGCCAGCGGGAACGGCTGGGTGCCGCGTATG 154510 28 100.0 32 ............................ AGCGAATACGGCAGCCGGATCGAGGCGCTGCG 154570 28 100.0 32 ............................ TTGGGCAACGCCCGGGAGAAGACGCGCAAGGC 154630 28 100.0 32 ............................ CGCGACAAGCGCTGGAAGAAGGTGACCGAGGA 154690 28 100.0 32 ............................ TGCTGGGGGATCACCCTGCAGGTGGCCCGCGA 154750 28 100.0 32 ............................ TGCACCCCGCTCCAGTTCGGCGTGAGGGAAAT 154810 28 100.0 32 ............................ CCGAAAGGAGCGCAACTATGCGTCACATTGAA 154870 28 100.0 32 ............................ ATCATCGGCAGCATGATCGTGGCCAGCAATCT 154930 28 100.0 32 ............................ TTTGATAGCGTCGAGGCGTTGCTGCTGCTCAG 154990 28 100.0 32 ............................ CACACGGCGGCATCGGTGCAGTAGGCGTTTAG 155050 28 96.4 0 ....T....................... | ========== ====== ====== ====== ============================ ================================= ================== 65 28 99.9 32 GTTCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : AGCGACTACAGCAGCTGATGGGTATGGATTGGCTGACAGGCATGCGGGATCACACGCAGGTAAGCGCAGTGTTGGAAGTTCCTGCGGGTGCTCAGCACATCAACGTGGCGCGGAAGCAGTTCAACACGGGCAGCGAGAGCCGTGCCAAGCGCTATGCCAAACGGCACAGCATTAGCGAAGAGGAGGCAAGGAGCATTTACGCCAAGGTGGCGGCACGACGAATTGAGCTACCGTTTGTGCAGATCAATAGCCGATCTACTCAACAGCGTTTCAGCCTATTTATTGAACATGGCAAACCTGCAGCGTCTTCATCGGAAGGCTCATTCAGCCATTACGGCTTGAGCCCCAGCGCCACCGTGCCCTGGTTTTGATCCTTTTTTCTAACATGAAAATAGGCAGCTAATAATCAATGACTTAGCGGTATTGCTTCTGAAAGGGTAATGCCGCTTTTTTTGGTGAAAGCTCTTTAACAATCAGCACATTAATTTTGATATACTCTA # Right flank : ATTGAAATATCCAAGAGTGAATGGGCTTTTCTCTTCATTGTGTCGCGCACCGTTGGGTGCGTGGCCGCGCATCAGAAATTCCGCAACTACTCCTTCTCCTTCTCCTCATCCTTATCCTCTTCCCAGCGTTCGATGGCGCGTTTGTCGTCGGGGAGTCGCACCATATCGCCCACGTTGAGATTTTGGTGTGACTGAGAGCGGTGGCCGCGTTGGTCGAGAATGGCGGCCACACTGCCAATGCTCACGGCATCTTCTTCGCGGTAGGCTTCTACTTTGACCCGCACAATGCGGCCTTGGTAACGGGCGGAAAGCACGGCACCTGGGTAGGGGGGCGTGTGTTCGGGGTCGTCCTTGAAGAGGGTTGCTACGCTGGCGCTGCCGGGCTCGTCCCATTCAATGTGCTTGTGCATGGTGAGCGTCCTTACTATGGGTGAATAAAAATAAGAAGGCTCGTTAAGTGTAGTGTGCGTTGGCAGAACTCGGCCAATCTAATCAAGAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //