Array 1 99646-96184 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAIJDP010000071.1 Flavobacterium salmonis strain CIP 111411, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 99645 36 100.0 30 .................................... TTATTTCAAATTCTTCTGATAAAGTATGTG 99579 36 100.0 30 .................................... CTTTTCTTCAAATGAAATCATATTCCAAAG 99513 36 100.0 30 .................................... TATTCATGTTCTGAACCGTTCAAACAATCT 99447 36 100.0 30 .................................... TGCCTTTTATTTCAGAAACCACCTGTTGTA 99381 36 100.0 30 .................................... TGGGAGCTACAAAAGACACAACTAACCAAT 99315 36 100.0 30 .................................... CATCTTCCTGGCTTAATGCGTAAGTGTAAT 99249 36 100.0 29 .................................... TCTTTTAATAATTTTATTTTCATAACTAT 99184 36 100.0 29 .................................... AAACAAATCAAACGCTAAATCTTCATCAT 99119 36 100.0 30 .................................... ATTTAGGAAATATCAATAACTATACTAACT 99053 36 100.0 30 .................................... GCTAACGCCTGTTTTTTCGTTACCGTAGTT 98987 36 100.0 30 .................................... TAATGGTATTTCGTCAGTATGCTTTATCCT 98921 36 100.0 30 .................................... AAAAGTTAGCTGTCCATAATGCTTTGAAAG 98855 36 100.0 30 .................................... TCTTGGATTGCTTAGATGGATAAACAGATG 98789 36 100.0 30 .................................... GTCTGTTTGTTTATGATAGAAAATACAGTA 98723 36 100.0 29 .................................... ATAATAAGTCAATGCTCCTGATCCTGAAT 98658 36 100.0 30 .................................... AAGAATCATGCGTGTCATTTAATTCACACA 98592 36 100.0 30 .................................... TTCTGAAACAATGTTTAGGTTGCGTGTCAA 98526 36 100.0 30 .................................... GACGATTTATTTAACGAACTTGATAATGTT 98460 36 100.0 30 .................................... CTTTAGCTTTTAATTCGCTCTCAATTCCTT 98394 36 100.0 30 .................................... ATTTGAATTATCTTTATTGTGGAAGTTATG 98328 36 100.0 29 .................................... CAAAAGATAAAATATTAAAACAAATAGTA 98263 36 100.0 30 .................................... AAATGTGCTGAGTTATGAAAACAACTAAAT 98197 36 100.0 30 .................................... ATCGATGTAATGCTCGTTTTTTAATATTTT 98131 36 100.0 30 .................................... GGTAATTAATTTATATATTTGTACGTAAAT 98065 36 100.0 30 .................................... TAAATGTTTAGATCCTTGCAAAGGAGATGG 97999 36 100.0 30 .................................... ACTTGTTCGATATATCTTGTTCCTAAACGG 97933 36 100.0 30 .................................... CTTTTGAGCAGTTAGGAATGATTAGTAGTT 97867 36 100.0 30 .................................... TCTGTCATAATTGTTACCTTTTTTCCTGTT 97801 36 100.0 30 .................................... GTATGGTAAGTACGGGACAAAATATAACTG 97735 36 100.0 30 .................................... TGGAACGAACATTTTTTACATCAAGTAGCT 97669 36 100.0 30 .................................... TGGTAATTATGTTGAAATTTACGATAGAGA 97603 36 100.0 30 .................................... GAGTTCATCCAGTAAAAAAAAGACCCGTAG 97537 36 100.0 29 .................................... ATTTTCTGTGTCAGTTACCGTTTCTAATG 97472 36 100.0 30 .................................... ATTGTTACTTTTCGCCCGTCTGAATAATAA 97406 36 100.0 30 .................................... GGATTACTCTGATGCTTTAATGATGCGTAT 97340 36 100.0 30 .................................... ATTGTTACTTTTCGCCCGTCTGAATAATAA 97274 36 100.0 30 .................................... AACTTTTTTTCTTCAATAAACGTATATCCT 97208 36 100.0 30 .................................... TCATTGTCTAAATAATAATCAAAGCAAATG 97142 36 100.0 30 .................................... ATTTGAAAAATGCTCTTTAAAGTCCTTAGT 97076 36 100.0 30 .................................... CTACACGCAGGCGTTTATTTTCGTTGTCAA 97010 36 100.0 30 .................................... ACCCGGAACCCACCTCTAAAACAGTAGTGT 96944 36 100.0 30 .................................... TATTTGTAATGATTTTTGTATGGTTATCAG 96878 36 100.0 30 .................................... TCGTTGGGCTATCGTCATAAGCATCACGAA 96812 36 100.0 30 .................................... TACTTTGGTTGTGGTTTTGTTCATTTCTGT 96746 36 100.0 30 .................................... ATGTAGCAGAGTCTTGGTAAAGCTCTTGCT 96680 36 100.0 30 .................................... TCATTGACGAGGTTTCAATGATGCGCCCTG 96614 36 100.0 29 .................................... TCCAGCAAGAGCTTTACCAAGACTCTGCT 96549 36 100.0 30 .................................... ATATATTGCTATTTCTTTTAATAATTCGTG 96483 36 100.0 30 .................................... TAGCTTCATTAGGTAAAATTCTAGTTATTA 96417 36 100.0 30 .................................... CTGATTGTTCTGATTTTGCAACTTCCAACG 96351 36 100.0 30 .................................... AAGGAAATGCACGCTTATGTAAGAGATATG 96285 36 100.0 30 .................................... GAAAAACCTTTATCAATGAAAGATAAAAGG 96219 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 53 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : AATTTACAATCTTTCAGCCAAAAGCACTACTGCAAATATATCTTACATGAATGAGGTTGTTAATGAACAAAAGCTCTATGAAGTTAAAGAGGATTTAGAATCATTAGATTTGTGGGATAATGTTTTTTCTGATTTCAAAAAACAAACAACAAAAAGACCTGATTTTTTTAAGAATTTGAATAATGTCCTGAATAAATATTATTTAGAAAATGAAATTTTTGATGCAAGAGGGAAAATAAAAGAAGTTAAATTAAAAGAAAGTGGTTTGACAACACCAAAAGGAGGAGATGTTATTGATAACTTTAAAGAATTTCCATATATAAAATTTAAAGTAAATAATTTCAATGCTTTAGTTGAAGGAATTGATTTTAATATATCTTCTACAGGGAAAATTGTAAGAATATAAATCTTGAGATTTAAGAGTTAAGTTCTTTGATATAACGTTTCATAGTGTTAAACCACAACTGAAAATCTGTTGACAGAAAATAATATAGATTTCA # Right flank : AGTTGGCTTGTTACCTTCTAGTAATCAAAAGATTAAATTTAAATATCGTATAAAAAAATGCTTCTTTTTTGGATTGATAACCCACGATTGAAGCATTTTTTTGTTTCTAAACAATAATTTAGTTCAGTTTGGGCTAAAACAATTCCAGTTGTGTAGGCTGAGGAGCAGATGGCACGGCTGCTTTTCCCCAGAAATTCAAAATATTACCAAATTGTTTATCGGTTATTCGGAGCACGCTTACTTTGCCTAAAGGCGGAAGCAGTTTGTGAATTCTCTTTTCATGAACATCGGCGCTTTCACTACTTGCGCAGTGACGTACATAAACAGAATACTGCATCATCGAAAAGCCGTCCTTCAATAAATTAGTTCTAAATCCGGACGCATTTCGTCTGTCTTTTTTTGTTTCTGTGGGTAGATCAAAAAAAACAAACAGCCACATTATTCGATATCCGTTAAGCTCCATAGTACAGGATATTTAATTTTTTTTCGATTTCCCGTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //