Array 1 1124920-1122544 **** Predicted by CRISPRDetect 2.4 *** >NC_013799.1 Hydrogenobacter thermophilus TK-6, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1124919 30 100.0 36 .............................. TTAATCCGTCAATAAGTTCCTCGCTTGCTTCCGGAA 1124853 30 100.0 37 .............................. TCCAGTTCCCGTTATCATCCCGCTCTCCACCAAGAAC 1124786 30 100.0 37 .............................. TGCAAAATTCCAAAAACTGGAAAAATGCATAATTCTT 1124719 30 100.0 37 .............................. TGAAGAACAGCAGGGCAAAAGGGAAAAGGGTGGAATA 1124652 30 100.0 37 .............................. TGTATATATAAGTGAAGGTCCCCTTTAAACCCCCGGG 1124585 30 100.0 37 .............................. GATTTTTGGTCCTGAAATTTCTCTCTCAAGTATACCC 1124518 30 100.0 37 .............................. GGAAAGTTTGGATAGAAGGCGAGCTGTTTTCTTCTGT 1124451 30 100.0 37 .............................. TCTACCACGCCTACGAAAAACAAAAAAAGATATTCAT 1124384 30 100.0 37 .............................. GGCGGTAAAGTAGATATCCCCTTCGTCAATGCCTATG 1124317 30 100.0 37 .............................. GCATATATCATCAAAAACGCTATGATCAATAAGGAGT 1124250 30 100.0 37 .............................. TGTTCCACATCTCTTTTGGTTGCCTCTCAAGGATTTG 1124183 30 100.0 40 .............................. AGGCTTGCAAAGTCTTTAAAATTACCTCTTCTGTGTGTAT 1124113 30 100.0 38 .............................. TCCCTGTAGGTATTCCAAACTCTTTGAAAATGTGAAGA 1124045 30 100.0 40 .............................. AGGCTTGCAAAGTCTTTAAAATTACCTCTTCTGTGTGTAT 1123975 30 100.0 38 .............................. TCCCTGTAGGTATTCCAAACTCTTTGAAAATGTGAAGA 1123907 30 100.0 38 .............................. CTGGGATTGCGCTGGATGCAAATGACAGTGTTGCAGGA 1123839 30 100.0 36 .............................. TGTATATCCCCCCCCTGCCTCAAAGAAAAGTGTATT 1123773 30 100.0 36 .............................. GAAAGTATTAGAACTTGATACTCAAAGCTTTGAACA 1123707 30 100.0 36 .............................. GCTGTTTGGTTGTACGAGCCTTTGTCTTCCGAGCAC 1123641 30 100.0 37 .............................. GCGATATCAGGAAAATAAGAAAGAACACGAGAAAGAA 1123574 30 100.0 36 .............................. TCGTCAAGGCTACCCAAGAAAAGCTAAACATACTCT 1123508 30 100.0 38 .............................. CTAAATGTGGCTCGCTGGAAAATCCTTGCAGCTCATGC 1123440 30 100.0 37 .............................. TCCAGTTCCCGTTATCATCCCGCTCTCCACCAAGAAC 1123373 30 100.0 37 .............................. TTAAATGTGGCTCGCTATTCATTTGGCGGCGCTTCAC 1123306 30 100.0 36 .............................. ACCTCAAAGGCGCTGACTGCCTTTCTTGGAAGGTGT 1123240 30 100.0 36 .............................. TGAACTTTGCCTCCTGTAGCTGCTCTACATATCTCA 1123174 30 100.0 37 .............................. TTATATCAACACTTACTCGCTTATGCCTATGTTAAAT 1123107 30 100.0 36 .............................. TGAACTTTGCCTCCTGTAGCTGCTCTACATATCTCA 1123041 30 100.0 37 .............................. TTATATCAACACTTACTCGCTTATGCCTATGTTAAAT 1122974 30 100.0 37 .............................. CGGAGACCCATATTTATACCCTGTTTTATTGGAGGCG 1122907 30 100.0 37 .............................. GGGCACCCACAACAAGGGAGAAAATAGCAGACATAAA 1122840 30 100.0 37 .............................. TTATATCAACACTTACTCGCTTATGCCTATGTTAAAT 1122773 30 100.0 37 .............................. CGGAGACCCATATTTATACCCTGTTTTATTGGAGGCG 1122706 30 100.0 37 .............................. GGGCACCCACAACAAGGGAGAAAATAGCAGACATAAA 1122639 30 100.0 36 .............................. GATGCGTGTAAAAAAGGCGTTTGGTCCACCGGGGAC 1122573 30 80.0 0 ......................TCCTT.T. | ========== ====== ====== ====== ============================== ======================================== ================== 36 30 99.4 37 GTTTATTAGGTGCCTATAAGGGATTGAAAC # Left flank : ATAGAGTGTTATAAGCTTTACAAGCATTTTATGGACGAGGAGATTTATAAACCTTTTGTAGGAGAATGGTAGATGTTTGTAATACTCGTTTACGATGTAAAGGAAGAACGAGTGGCGAAAGCACTAAAAATTTGCAGAAAGTATCTTACTTGGGTTCAAAACTCGGTATTTGAAGGCGAAATAACGGAAGCAAAGCTCAGGATGCTCAAAGACGAACTAAAAGGCATTATGGATGAAACCTACGACTCGGTGATAATCTACAAGTTCAGGACAAAGCAGTATTACGAAAGAGAAACCCTCGGGATAGAGAAGCCTTCCCACGAGGACTTTATAGTCTAAGCCTTCCAATACTTTGTCTATCCCCCGGAATTTTTGCAAGATTGGAGGTGGACAGAAAAATAACCCCACTTGACTAACTTGCCACTAGGGTTTATAATACACATGCAAGCTTACTACACCAAAAGCTTTTTGACAACTGAATATGGGTTTGTTCCTAACAA # Right flank : TCCTGATTGCTGATCCTCGCTTCCTCCTTTTTACCGAACATAGTATAAGCTACAATATATGTCAAGAATTAAGGATGAGTAAAAAGCAGTTAGGTGAATATACAAGGAGAAGCATAATCCTAACAGCAAAAAGACTCTTCGTAGAGAAAGGGTACTTCAACACAAGCATGAGAGACATAGCAAAAGAAGCTGGAGTCAGCACGGGAGCTTTATACCATCACTTTAAAAGTAAAGAGGAGATAGCAAGTGAGATATACAGAGAAACTGTAGAAAAGATAAAAGAAAGACTTGAAACAGCTCTCCGTAAAGGAAAAGGAACAAAAGAGAAGATAACAGGTATAATCAGGGAACTTCTTATACTTGCAGAAGAAGACAGGTACACAATGGAGTATGCTCTGTATGTTAAACATAGGGAAATTTTAGATGTTCCTGTTTGTTCCACAGAGCCGATGGAACTTCTCAAGAAATTTTGTAGAAAAGAGATAAATAAAGGAAGAATA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATTAGGTGCCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //