Array 1 15531-15895 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDCP01000166.1 Geobacillus thermoleovorans strain N7 NODE_45_length_18029_cov_50.7631, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 15531 30 100.0 35 .............................. TCAACCCCACAGTCTGTCTAAAAAGTCATCGGTCG 15596 30 100.0 35 .............................. TATTCTCTCGCTGTCTTGGCGATTGGCTGGCTTCC 15661 30 100.0 39 .............................. GCTACATTTGAAAGCTCTTGAGTAATTTTCAACTTGTTT 15730 30 100.0 39 .............................. GCTGCATTTGAAAGCTCTTGAGTAATTTTCAACTTGTTT 15799 30 100.0 37 .............................. TATCCGCTCATTGATGACCCACATTCCGGACATTTGA 15866 30 93.3 0 ...............G....A......... | ========== ====== ====== ====== ============================== ======================================= ================== 6 30 98.9 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AAATCACCCAGATTGTGATGGGGATGTCTGCTCGGACGAGATGGGAGGAAATATGGAAAGGATCGCTCATTAATGTAATTATGCAGCAACTTAAACATGTTGATGTGCTTGTTGTATCTGACAGATAGAGAAGAGGGGCATCTTTGATCATAGTTCCAAAAGAAGACTCCCGTTCGCAATTCAAGCAATAAGCGGAAGATGAATGTCGGCTGGCGCCAGCCAAAACGTATGATAAAATCAATGTGCATTGCGTACAGGCTGTTGACGGACTTAAGCGGCTAAGCAGCGCACGAGACGAGAGGAAATTCAAAGTGCACGCTGTGCATAGCATTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAATCTTTTTACACACTTCAAGCCTACAGCCATCGTACATGAACACGATTGACAGAATTTTTGGATTATGGTATTCTGAAAATAACTTTGGAGCAAAAAGATTGATATATCAAGTGCTTTCTGGG # Right flank : CCTTCGTGTTTTGTGCGAACGATCGTCGCAATAAACGCTTTTCATCACACCGTAAGCAACTCCATGGAGCGCACATAGGTTTAAATCTGTGCGGTGGAGAGAGGTTAAGAGTTGGCGAAGATGACTGAAAGAGATGAATCAGCATTCGCGGGCTATGTCTGTGCGATACCGGCGATCCGCTTCTGCCGTTTGTTTTAGGCAGGAGTTTTTTATTGTTATACAGCCGCTTTATGTCCATCCCGAATTGTCGTTCCAGGAAGAGAAAACGGCGCAATTTGTGTACGAGACGCTGCAATCATTCGGCCATCTTGAGTTGTCGCGGCCGACGAAAACGAGCGTCATGGCGCGGCTCATTGGCCAACAGCCAGGCCGGGTCGTCGCCATTCGCGCTGATATGGACGCATTGCCGATTCAAGAGGAAAACACGTTTGAGTTTGCCTCAAAAAACCCAGGCGTGATGCATGCGTGCGGACATGACGGCCATACGGCGATGCTTCTCG # Questionable array : NO Score: 9.01 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 35789-33961 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDCP01000146.1 Geobacillus thermoleovorans strain N7 NODE_27_length_47591_cov_46.0701, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 35788 30 100.0 35 .............................. ATGCGCTGCGGCGTATTGCTCTGCCGAGAGCTTGC 35723 30 100.0 36 .............................. AGATATAACGAGAAAACACAAGAAAAATGGGCAAAA 35657 30 100.0 38 .............................. GAACAATATTGAATATCATTTTACACTCCCTCATGTTA 35589 30 100.0 40 .............................. TATTCAAACGAATATATCTCAAACGACTTGGACGGCCTCA 35519 30 100.0 37 .............................. ACTTCCACAGTATGCGAAATCATGAAAATTATCTTTC 35452 30 100.0 36 .............................. CCTCCGTGGCAAAAGAATTATCAGCGTGTCAGTACA 35386 30 100.0 34 .............................. CACATTCTTGTGACATTTCTTCTTTGATCCACTC 35322 30 100.0 37 .............................. TTTAGTGCTTCATAGCTTGTGTATTGTTTTTTATTCC 35255 30 100.0 34 .............................. TGGTGAACCCGTACCGTTGTATGTCAGATTGATT 35191 30 100.0 39 .............................. AGTCCGCGACGGAGATATACGACACAACAACCGCAATGG 35122 30 100.0 38 .............................. ATGTGAACACTAACAAATACATCCGCGCCCCACTTTTC 35054 30 100.0 38 .............................. CGAGCTGCAAACGGCGAAACAGAATGGTATATTGATGC 34986 30 100.0 38 .............................. GAAACGCTTCACGCCGATGATTTGCCCTTGCGGCTTCG 34918 30 100.0 39 .............................. TAACGACTATCTACATTAACACAATGACCGAAACCGCCG 34849 30 100.0 37 .............................. AAAATCCTTCAAAAATGCTACGACATGATCATGTATG 34782 30 100.0 37 .............................. CGGTGGGAATATGTACATTGTCCCATCTCCTAGCATG 34715 30 100.0 35 .............................. TTGGCTTGCCATCGTCAGCGTGTAGGTCGCCATCC 34650 30 100.0 38 .............................. CTTTGTCCCTCATGCTTATGTCGTTCGCGATCCGCCAA 34582 30 100.0 37 .............................. TCATACGCCGGACGCAAATGTGGCCGCTCGTCTACAC 34515 30 100.0 35 .............................. TCCTTTCAAATTTTGGTCAAAGACACAGACCAAAT 34450 30 100.0 36 .............................. GTGACAAACGGGCTTGCAAGTAAGAAACTAGGCATT 34384 30 100.0 37 .............................. TATATTGTTTCATTGTTCTAGCAACTGGATTAATTCT 34317 30 100.0 36 .............................. TCTCTAGAAATAGAGGTGAAGGAAATTGCAAAACGT 34251 30 100.0 34 .............................. GCTCGAGATTTTCGATATGGTCAATCAAGTTCAT 34187 30 100.0 36 .............................. ACCTTTAGCTCCTTCGCTGTGTCTCGGAAATTTGTC 34121 30 100.0 37 .............................. CCGTTTGACCTTTATAATATTTTGGCTGTTATCAATG 34054 30 96.7 35 ................C............. CGGAGTCGGCCGCTTTCTCCACGCGTTTCCGCCCA 33989 29 73.3 0 ......G...CG.....A..A.GC-..... | ========== ====== ====== ====== ============================== ======================================== ================== 28 30 98.9 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GTGATGATTGTGGAATTGAACTTGACAGAGATCGAAACGACAGTATCAATCTTTCGAGATATCCTGCATAGCGACTGGTACCGTGAGTTGCACGGGAAGTGAAGCCTTCGGAGCGTCAATCAAACGAGAGCAGTTTCGGCGAAATCGGACAAGGATCAAGCAGGGAATGAAGCATGGGATTGAACAAGGACGCCAAAAAGGATCGAGGAAGGGAAACCCGACATCGCGAAGGAAATGTTGATGAAAGGGTAGGATATCGACACGATCCACGAACTGACCGGGCTGCCGGCGGAAAAGATCGAACAGCCGAAGAAGTCAACCCGCCTTTGCATTGTCGTCGACCTCCAATCATGCAAAAAACCCGGGGGATCGACGACAATGGTTTTTGACGCTCCAAGCCTACAGCCATCACGATTGAAAGTCATTGACAGAATTTTTGAAACGTGCTATGCTGAAAATAGCTCCAAACCGAAAAGCTTGATGGAACAAGCCTTTTTGGG # Right flank : CCTCTTCAATGTCACGCCATCGTATGAACGTCTTCCGTTTGAAGAAACCGGATGGCTGCACTTCCCCGATCGACCGCTTCGTTTTGCTTCGGCTGCTCATTCTTGCGCCGCTTGCTTTGCAGGAAGCCGCTTTTTTGTTTCGCACATGGAGAACGTTTTGGCATCTGCTTTTTTTGTATGGCCCCATTGATCCACCAGGCATGGTTGTTCACCGCCTTTCTTTGCCGCTGCTGCATTTCCTCAGTCCGATGCGATATACTTGACATGGGAACAATCACGCTTCTTTCTCGTTCACCGTCGTGTCGGCGGACATGCTGCGTTGGCGTTGGACGGTTTGAAAGAAGGCGGAGAAAAGCGACAGGGGTGGGATGGATGCGCCGCAAACTTCGCGATCTTGGTTTTTCCATCGGCACGCTTCCGACAGGGGAGCGCAATCAAGTCACCGATGTGCCTGGGGTGCGGGTCGGTCATGTGACGATTCGGGAAGATATGAATGAGCG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 158-1174 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDCP01000178.1 Geobacillus thermoleovorans strain N7 NODE_56_length_12528_cov_41.0935, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 158 29 100.0 37 ............................. TTCAAGGGACGAACGGTAAATTGAAGATAGCAGGAAA 224 29 100.0 37 ............................. GATGGCGTCATTGACGGTGATGGGGTGGAGCAATACC 290 29 100.0 37 ............................. AAAACCGGAATACAGCTGGCGGCATCTTTCCAACGTC 356 29 100.0 36 ............................. CTAGAGCAAAGGTACGCGAACGTCAAGCGAACATGC 421 29 100.0 35 ............................. TGTCTTGGGATCATGATCACATCCGCGAGGGATTG 485 29 100.0 36 ............................. GCGAAGGAAAATCGCTGCTTGAAAAAGACGCCTAAT 550 29 100.0 36 ............................. CTCTTAATGAACCTGCTTGTAGAAATCGCAAAGTCA 615 29 100.0 37 ............................. TGCCGGAAAAGGTAAAATCACCAAGTTTCACATTCCC 681 29 100.0 37 ............................. CGCTTTTTCATTTTCCTCTTTCATTCGCAAGGCAAAA 747 29 100.0 36 ............................. TGCTTGCCCCCCATGAGCGGTCCGGCATTTTCACAA 812 29 100.0 37 ............................. AGTGAAAAAATACGCTGGCTTCTTCCGCGTGACGAAC 878 29 100.0 36 ............................. AGCAGGAGTATATCGGCTACGTGCAAGGCTATGTCC 943 29 100.0 42 ............................. TTTGCTCCTTCAACCGCTCATAGAGCGCTTGTTTCGGATAGT 1014 29 100.0 37 ............................. TTGCTTCCATCATGGCAAGTTCCCGTTTGGCATAGCG 1080 29 100.0 36 ............................. CAATATAGTCGAGTTCTTCCTCTTCAGAAACGAAAC 1145 29 96.6 0 ...........................G. | A [1169] ========== ====== ====== ====== ============================= ========================================== ================== 16 29 99.8 37 GTTTAATCTGAACGGAGAGGGATTTAAAG # Left flank : CGGATCACCGACATTCGAGCGAATTCCATGGCCGGGTTTGAAGTGGCACTCGATGGCATCTTGTTGGCTTATTCCTTGGTCACACTAGGGCTGGTTGAGCGCTGACGCTCAACTAGCACCACGGGTTAATTAAATTTTGATACTCTTCTTGCCTAATG # Right flank : GCCGCTTGTGTGCAGCGGCCTTAGTTGAGCACTCCAATGATCGCATCTTTGGTATCACAGTGGGGCGCTAACTAATCGCCACTCCTGCACTCGCATATCCCGTGACGGAAGCGGCGATTGAAAGACCGGAAGTGGTGATGAAAAACGCCATGAGCAGCCGGTCGCCAGCATTGACAGGCACGTTTAATCCTGTGATGATGCCGCTGGCGTTTTGGGCTAGGGAGATGGGAAAGGTGATTGATGGCGTTAATGTAATGAGCGTGCCTGGAATAGGCGAAAATACGTTGCTGGATGGAGAAGTGGCGATATACAATTGAGCGCGGATCGTAGCCGTTCCTAAAAGCGCTGTGCCCGTTGTGGCGGAAAAATTGGCTGCGACAGCAGTAATGATTCCTGAACGCGGAATGGTAAAGGAAAAATTCGATGTGCCGCCAAGGTTTATGGTTCCTCCCACTAAACTGATGCTTGAAGCAGCGTTTCCAAATCCGATCAAACTTGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATCTGAACGGAGAGGGATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 7064-7974 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDCP01000188.1 Geobacillus thermoleovorans strain N7 NODE_65_length_9264_cov_42.428, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================================================= ================== 7064 30 100.0 36 .............................. TCTGCCATCGCCGTTTCGAATAACTCCTTCCAACTT 7130 30 100.0 38 .............................. CAGCAAAATCAAGCAGCTTGAACGAGACATCGAGCGGC 7198 30 100.0 34 .............................. CAGCTTATGTGCGGCGTTAGGAATCGCGGCGGAG 7262 30 100.0 35 .............................. GACGACGAGTTCCGCAAACGAGATGTGGAACTTGT 7327 30 100.0 35 .............................. GCAATATCGCTAGCATTGAAGTCACCTTCTCCGAC 7392 30 100.0 35 .............................. ATTGCTGCCCAACAAGCACGAACCGGTTGCCATTC 7457 30 100.0 38 .............................. GTAACAGTTTCGCCGTTTTCTCCGGCAAGTCGGCTTCC 7525 30 100.0 35 .............................. CAACAAATCGCCTACGGTCACGTCATCGGTCTTGA 7590 30 100.0 39 .............................. CCTAATGTCCGATAACAGCCTACCAATCCCAATCCGTCA 7659 30 100.0 38 .............................. ACGACGATCATTCAGGATTTGAAGCAAACCGCAAAAGA 7727 30 100.0 121 .............................. AGTTGTGAATATGCGTCAAGGCCATTCCTGTGCATGGAGTGAATCCTTTGACACATAGTACGATGACTGGCTTTTCATAGAAGAAGAAACAAGAATGCTTCTTCTTTACGCCAAAATAAAG 7878 30 100.0 37 .............................. ATCTGTTCAACAGTTAAATCACGTGGTACAGGAATAC 7945 30 86.7 0 ...............G..G....C....G. | ========== ====== ====== ====== ============================== ========================================================================================================================= ================== 13 30 99.0 44 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : CAACCCGTCCCTTTCCGACGATATCGTCCGTGTCGCCCGTTCGCCGATCCGCAAGCTCGGGCCGAACGACCGGCTCATCGCTCCGGCGACGCAATACTGCACACTATTTGGCAGCGTTCCTGCTGGTCTCGCCAAAGGAATTGCCGCGCTGTTGCGCTTTGATGATGCGAGCGATGCAGAAGCCGCCGCTCTGCAACAAACGATCGCACACCACGGAATCGAAGGAGCGCTTCGGCAATACGCGGGGCTTGAGAGTGCGCACCCGCTTGTGGCCGCGGTGAGGGAAGAGTACGGGAGAATGGAGAAAAACAAAAGCTGACCGCCTTTCAAATGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAATATTTTTTTTGCGTCAAAATCCTACAACCAACACGGCTCAACAGTATTGACAGAATTTTTGAAACGTGATATTCTGAAAACAGTCAAAAGGGGAAAAGCTTGATTTTATGCGAATGGTTTGG # Right flank : CGCTATACAGTACGGTACAACTTTTTCTGTCCCCGATGCAGGATTTTCACCCCCTGCTTGCGAATGGATAGAATTGAACACGTTCAAAGAGGGGTGATGGAATGGCTATTGACCACGACCGGTTGTTTAAAGAACTGATCCAAACGTTCTTCGAAGAGTTTCTTCTCCTCTTTTTTCCCGACATGCATGAACACATTGATTTCAGCCATTTGTCCTTTCTGTCCGAAGAACTGTTTACCGATGTCACGGCAGGTGAAAAATACCGCGTCGATCTATTAGTCGAGACGAAGCTGAAAGGGGAGGATGGGCTGATCATCGTTCATGTGGAGAATCAAAGCTACGTGCAACCATCGTTTCCAGAGCGCATGTTTATCTATTTCAGCCGTTTGTTTGAAAAATACCGCACCCGCATCGTTCCGATCGCTGTCTTCAGCCATGACACCCTCCGCGAAGAACCGTCCGTGTTCTCAATCGAGTTTCCCTTTGGCGACGTGCTGCAG # Questionable array : NO Score: 8.55 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.65, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 1721-3511 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDCP01000206.1 Geobacillus thermoleovorans strain N7 NODE_81_length_3648_cov_44.8637, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 1721 29 100.0 36 ............................. CCAAGTGAAGCAAAACGCCGACGCGAAACTTTGCTT 1786 29 100.0 34 ............................. AGGATTTCGGACATTGTCGGAACCGACAAAACGT 1849 29 100.0 37 ............................. TTTGTTCAGATCGACCGAGCGGTTTTTGAAGATGTGC 1915 29 100.0 34 ............................. CAGCTATGAGAAGGACGGCCGGCGCGTGCTGTCA 1978 29 100.0 33 ............................. TGAATATAACGAGCTGCATGATCGGAAGACCGC 2040 29 100.0 37 ............................. ATTGAATTGACCGACTTTCAATTATTCATTGTTATGC 2106 29 100.0 39 ............................. TTGCGACTGTGTACAGTCTTGACCCCGAAGGAACTGTGA 2174 29 100.0 36 ............................. GAAGCTATCTTGACTTACCAGCCGAGGAAGGCGGTG 2239 29 100.0 37 ............................. TTAAGGAATCCATCGTGAATGCCTACGCCTTAAAAAC 2305 29 100.0 35 ............................. TTTGTCTGTTTCAACGTCACACCCGGCACTTGTTC 2369 29 100.0 35 ............................. CATTCTCATAAATCATGCGCCTGTTCTTTAGTTTT 2433 29 100.0 34 ............................. AAGTCATCGGCGACAAGGAACGGGACAGTTATGC 2496 29 100.0 36 ............................. CTTTTCAAAATGATTAGGTATCTCAGCGAAAATCTT 2561 29 100.0 35 ............................. TTTAGACCTATTTTGCCGATCATGCATCCAATCGC 2625 29 100.0 35 ............................. TATCCCGGTCTCTCAGGGATCGGAATAACTTCGGC 2689 29 100.0 36 ............................. TCAATTAGCACAGCTTCGACTTCTGTCGGCAAAGCT 2754 29 100.0 35 ............................. CTTGTAGAGTTTCACGTGAGGTTTCTGGCGTCCGC 2818 29 100.0 39 ............................. TATAAATCAAGTCTCTAACACGGTGCATGAATACATAAG 2886 29 100.0 39 ............................. GATAGAACCATTGAGGATACTTTTGATTGGATTGATCGT 2954 29 100.0 39 ............................. GATAGAACCATTGAGGATACTTTTGATTGGATTGATCGT 3022 29 100.0 35 ............................. AATTATTCATTCGCTTCTTCAAGTAATTCATCAAT 3086 29 100.0 34 ............................. GTGTTTTAACGACATCTTTCTTTTCTTGATACTT 3149 29 100.0 37 ............................. TGATTGCCTGTCGCACAAACGATAATAATACCTGCTT 3215 29 100.0 39 ............................. TTTTAAATCCTTCTAAACAAGATGTACAGAGTTTACCTG 3283 29 100.0 37 ............................. TGTGCCGGATGTGGCAATTTCATTCAAGCTATTCGTG 3349 29 100.0 38 ............................. GTTGTGCAAATGAGTCGATTTTTTGCTGTGTGTTCTGC 3416 29 100.0 38 ............................. TTATCAGTTGTATAAGGAAACCGCGCGCGTCATTATGC 3483 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 28 29 100.0 36 GTTTAATCTGAACGGAGAGGGATTTAAAG # Left flank : TGAACGATATAAACCGTTGAAAGCTTGGTGGTGAGCCATGTTTGTTATCATTACGTATGACGTAGCGGAGAAGCGGGTCAACAAAGTTTGCAAAAAATTAAAGGAATATCTCACTTGGACGCAAAATAGCGTATTTGAAGGGGAGATTTCGAAAAGTCTGCTGATGAAGTGCATGTATGAATTGGAGATGATCATTGATAAAGAAGAAGACTCCATTTACTTATACGAAGTAGAAAACCCGAAGAATATAAAAAAGCGGGTATTTGGTCAGGAAAAGAATTTTGATGAGTTGTTCCTCTAAGCTTTAAGAATTTGCAGTGAACCGCATTTTAGCGGACGAATGGGAGAAATCTTGATTTATGAAAGGGCGGTGCTCCATTATTTGCGTAACATTAAAAACACGATTAACACTTTACTGCAAAATACGGTATAATTGATGCGTAGGCATTAGCGTGAATTGCTTGCTACATCAATAAATATTATTTTGTAACTGATAGGGG # Right flank : CTATTAATTAAACCCGTGGTGCTAGATAAAACTCAGACAAGCATAAAAATAGCCCTTGCTGGCGGATCTCCAGTAGAATGAAAGTGTCACCCAACATTCGAAAGGAGAGATCCCCCATGCAAGAGCACTTTCATTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATCTGAACGGAGAGGGATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //