Array 1 1384170-1385603 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063301.1 Klebsiella grimontii strain M5a1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1384170 29 100.0 32 ............................. CAGCTGCGCATTGCTGGCGCCGGTCAGCGCGT 1384231 29 100.0 32 ............................. GGGCACGGTAGACGCGCCAGCAGGCAGCGCAG 1384292 29 100.0 32 ............................. TTGACTCCTGCGCCAGGTCGGGGCGCTGCCGT 1384353 29 100.0 32 ............................. TTACCGCAAACGCGGCGCATAGCTTGATCACG 1384414 29 100.0 32 ............................. CCGATCAAAGTCAAAACCGGGATCGTGATGCC 1384475 29 100.0 32 ............................. CATCGCCCCGAGCTTATCCCGGCATATCGTGA 1384536 29 100.0 32 ............................. CGACTGCTCGAGATTGCCGACGCGCTGGTCGT 1384597 29 100.0 32 ............................. GCACTGAGGACAGAGGCGTGTAGTGTCAGAAT 1384658 29 100.0 32 ............................. ACCATAGAACCAAAATCAACCTCAGGGTCAGC 1384719 29 100.0 32 ............................. ACAACGCACCGCGGCAGAACAGCGAAAAGTTA 1384780 29 100.0 32 ............................. ACCACGAATGAAAATGTGGCCAGGAAAGCCGA 1384841 29 100.0 33 ............................. GTTGGCCAGGCATACGCAGCAAATGCCATTGCG 1384903 29 100.0 32 ............................. ACTTGTTCAGAAAAAACCCCATTAGGAGGTTA 1384964 29 100.0 32 ............................. GGTGCTTGCCTGGGTAAAACTGAACAGGCTTA 1385025 29 100.0 32 ............................. ACCATTCTCATCATTCACGGCACGCAGTTAGT 1385086 29 100.0 32 ............................. CCGTTGATTTTTTCCGACGCTGGCTCAGTCTC 1385147 29 100.0 32 ............................. CGCTTCCGTTTCCTGAGCATATAGGTCGCCAT 1385208 29 100.0 32 ............................. CGACCGCCAGCGGCGTTGTTAAACACGCCTGG 1385269 29 100.0 32 ............................. GTGATTCCAGCGTTAACCCGCAACAGTTCATG 1385330 29 100.0 32 ............................. CCTATAACCGACGAAGGCAAGCGCCGCGCACG 1385391 29 100.0 32 ............................. CGATCCACTTTCTCACCGCAGAGCAAAAAGAA 1385452 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 1385513 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTCTGCGAAT 1385575 29 82.8 0 .....G......TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 24 29 99.1 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTAAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GGTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2074985-2075868 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063301.1 Klebsiella grimontii strain M5a1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2074985 29 100.0 32 ............................. GTTCCAGTGATTCAGGATCTGGCCGATAGTTG 2075046 29 100.0 32 ............................. CTTGGCGATCCTGTTCGTGAGGTATTCGGAAG 2075107 29 100.0 32 ............................. ATTGACCAGGCTTCCGCTGACCGACTGTTGAA 2075168 29 100.0 32 ............................. GCACTGACACACGAGGAGCTTTGCCAGTTAGC 2075229 29 100.0 32 ............................. ACTCCCTTCTTGCCTGCTTCCACTGCTCTGAT 2075290 29 100.0 32 ............................. TTATCTCAGGATATGAGTAGAACAGCAAAAAA 2075351 29 100.0 32 ............................. GTTTGTTTCTGTCTCTTCGCGCATTCCTTAAG 2075412 29 100.0 32 ............................. AACGGGCGCAGATATCCATAGGTCCACGTAGC 2075473 29 96.6 32 .........A................... TTACTGGAGATCTGATGCACTTGCGTTCAAAT 2075534 29 100.0 32 ............................. AAGATCAACCCGCGGATGAACACATTGATGCC 2075595 29 100.0 33 ............................. GCCAGTGAACAGCCTGGCGCTGTGGCTGAATAA 2075657 29 100.0 32 ............................. CCGGTACCGCGCACGTCAAATACTGAAGATGG 2075718 29 100.0 32 ............................. CCTATGAAGTCAGCAACCTCGGACGGGTCCGC 2075779 29 100.0 32 ............................. GCGGTGAACTCAGTTGCAAGTGGGCAGGGTGA 2075840 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================= ================== 15 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCAAACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACCCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGTTCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //