Array 1 549430-552812 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKSK01000003.1 Klebsiella pneumoniae strain EuSCAPE_IT219, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 549430 29 100.0 33 ............................. GCCCGCGCGAACCTGGGGCTGGGAGATTCAGCG 549492 29 100.0 33 ............................. TTGGCGGTCGACGGTGGCGAACTGCCTGATCAG 549554 29 100.0 32 ............................. GGGGGGAAATCAAGGTCAAAGTTGAGCTGGAT 549615 29 100.0 32 ............................. CCTCGATCATTCTTGCCAGTTGGGAGTCGGAC 549676 29 100.0 32 ............................. CACCTCGCCTATAAATCGTACCAGCCTGACAG 549737 29 100.0 32 ............................. GCATCGCTCGCCTCGTTCGGTGCTAACGCTGG 549798 29 100.0 32 ............................. CGGCTGCGCTGTTGCACATAGCCGCTCAACCT 549859 29 100.0 32 ............................. CGGCCGCGTTCTCCCCTGTGGGAGGGGTGGGG 549920 29 100.0 32 ............................. GAATTTATTGGGAGGTGATAGCTCTGGCAGGT 549981 29 100.0 32 ............................. GGTATGCAGGGCACACGCCAAAATAATTTTGC 550042 29 100.0 32 ............................. ATACGCAGTCATTAATCGCGGGTGTTACGCAA 550103 29 100.0 32 ............................. CCTGCTGTCATTTCCTTCGGCACTACCGGCGC 550164 29 100.0 32 ............................. TTACACAAGAGAAGCACTGACAACCATTCACA 550225 29 100.0 32 ............................. CCTAAATTGCCAATTTTCCTTGAGCGCTGGTA 550286 29 100.0 32 ............................. GTAACAGGTCAACTCTTTATCGCTAACGGCTC 550347 29 100.0 32 ............................. CTTTTCATTTTCTCATGACCGCCACCATTTCG 550408 29 100.0 32 ............................. AATACCGGCGGCAGGGATTTACGCCCGAGCAG 550469 29 100.0 32 ............................. CGCACGGTGCATTCACGCCCGCGCGCCTGTTT 550530 29 100.0 32 ............................. CATCGCTTTCCATCGCAGCTTTTTCCAGGCGC 550591 29 100.0 32 ............................. GTGACGCGCTGCAGTTTGCCAAAACCCTGCCA 550652 29 100.0 32 ............................. ATTTTGCGTACGCTCTCCCACAGCTGATCGTG 550713 29 100.0 32 ............................. TTTCCGGCAGCGTAGCCAACCCGGCCAACCGT 550774 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 550835 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 550896 29 96.6 32 A............................ GGTTTATAGAGGCTGAGGTATTCACAATGCGC 550957 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 551018 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 551079 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 551140 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 551201 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 551262 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 551323 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 551384 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 551445 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 551506 29 100.0 32 ............................. GGCCCAGTAATCCCCGCGAAGTCCTGAAGACG 551567 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 551628 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 551689 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 551750 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 551811 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 551872 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 551933 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 551994 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 552055 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 552116 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 552177 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 552238 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 552299 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 552360 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 552421 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 552482 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 552543 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 552604 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 552665 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 552726 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 552784 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 56 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGTG # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTCTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //