Array 1 249102-253029 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHGV010000004.1 Klebsiella pneumoniae strain 19KE 19ke_contig_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249102 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249161 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249222 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249283 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249344 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249405 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249466 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 249527 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 249588 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 249649 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 249710 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 249771 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 249832 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 249893 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 249954 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 250015 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 250076 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 250137 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 250198 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250259 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250320 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 250381 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 250442 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 250503 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 250564 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 250625 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 250686 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 250747 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 250808 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 250869 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 250930 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 250991 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 251052 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 251113 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 251174 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 251235 29 96.6 32 ..T.......................... GTTGGTAATTACTGCTGTGTGTTACGGATAAA 251296 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 251357 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 251418 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 251479 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 251540 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251601 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251662 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251723 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 251784 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251845 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 251906 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 251967 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 252028 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 252089 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 252150 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 252211 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 252272 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 252333 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 252394 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 252455 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 252516 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 252577 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 252638 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 252699 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 252760 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 252821 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 252882 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 252943 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 253001 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //