Array 1 1426-425 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGKV010000030.1 Klebsiella grimontii strain 4928STDY7071314, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1425 29 100.0 32 ............................. GAACGATGATGCTCAGCCAGCTTAACCTGCGT 1364 29 100.0 32 ............................. GAAATCATGTAAAGAAGTCGCCCAGTCCAAAG 1303 29 100.0 32 ............................. TGAGAAGCCCCGCATTCCGGGGCTTATATAAT 1242 29 100.0 32 ............................. TAACTTTTAGGCTCCGTATCCCCTTCGGCCAA 1181 29 100.0 32 ............................. ACACTTATCCGAATCATTGCAGTGGTAGATTT 1120 29 96.6 32 ............................A ATGCGCTGGCGCGACTCAAATGCCCGTTTGGC 1059 28 89.7 32 .....-......CT............... GAGTTTGTGTTCCCCTGCGGCTGGGCGGCATT 999 29 89.7 32 ............C..A............T TCGATGGCAACCACCAGGAACAATAAAACCCC 938 29 89.7 32 .A..........CT............... CATCGTGCCCGAGTTTATATGTTGCGCACAGG 877 28 79.3 32 ..G......T-.CA...A........... CGAGCGCTCTCCTGGTAAATCGGTAGCTCGGA 817 29 86.2 32 .....T......CA..............A TAGCGGCGGTGAAACGCTGGATTGCGGACAAG 756 28 89.7 32 ..........-.C..A............. CCGGAGGTGGAGACTATGAAAATGCCAACTAA 696 29 89.7 31 ...........ACT............... CTCTGAGGATGATATGCACCGGCACAGGTGC A [669] 635 29 86.2 32 T...........CA.A............. ATGCTCGAACGGGTAACGAGGTGATTTTTCTA 574 29 100.0 32 ............................. CGAAAACGGCAACCTTCATAAAAACGTCTGTA 513 29 93.1 32 ............CA............... TTACTTTTAAAATAAATGTCTATATTGGCTCA 452 28 82.8 0 ............CAC........-....A | ========== ====== ====== ====== ============================= ================================ ================== 17 29 92.5 32 GTATTCCCCCCGTGTGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACTCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTACATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGAGACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCAGTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA # Right flank : ACATAAAAACCGTAATGGTGGGGCTTTTGTCATGAGACCCTACAAGTAGATGGGACTAGGAAAGTTACTTTCTTCTGGAGAAGCGCCCACATTCCGCCATGTCTTGCAGGTTGCAATCAGAAAAGGCCTTACGACGGTAAATTCATGCCTTGGGCAGGTAAGGAAGTATGACGTTATAACTCTACATTTCTGGTTGATTAAGGCAGGGGGGCTTTCCTGCTTTAAAAACAATCACTAATTTTGAACGGTAGTCGTCTTCATCCCAACTGCTATCTGATGGACTAGGCACCTGCAAAGATTCAATTTATACTGTTTATATATACAGTGTGCGCCGGGAGACCGGTAGAGATCAAGGGGTGAAAGTCCCCGACCATTGAAGGACCAGCAATCCACAAGGTCCCCGAGTCATGCGTTGCATACCGCGA # Questionable array : NO Score: 5.41 # Score Detail : 1:0, 2:3, 3:0, 4:0.62, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.53, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGTGTGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 319511-320211 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGKV010000004.1 Klebsiella grimontii strain 4928STDY7071314, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 319511 29 100.0 32 ............................. CTTGGCGATCTTGTTCGTGAGGTATTCGGAAG 319572 29 100.0 32 ............................. ATTGACCAGGCTTCCGCTGACCGACTGTTGAA 319633 29 100.0 32 ............................. GCACTGACACACGAGGAGCTTTGCCAGTTAGC 319694 29 100.0 32 ............................. ACTCCCTTCTTGCCTGCTTCCACTGCTCTGAT 319755 29 100.0 32 ............................. TTATCTCAGGATATGAGTAGAACAGCAAAAAA 319816 29 100.0 32 ............................. GTTTGTTTCTGTCTCTTCGCGCATTCCTTAAG 319877 29 100.0 32 ............................. AACGGGCGCAGATATCCATAGGTCCACGTAGC 319938 29 96.6 32 .........A................... TTACTGGAGATCTGATGCACTTGCGTTCAAAT 319999 29 100.0 32 ............................. AAGATCAACCCGCGGATGAACACATTGATGCC 320060 29 100.0 33 ............................. GCCAGTGAACAGCCTGGCGCTGTGGCTGAATAA 320122 29 100.0 32 ............................. GCGGTGAACTCAGTTGCAAGTGGGCAGGGTGA 320183 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================= ================== 12 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCAAACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACCCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 112752-111869 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGKV010000008.1 Klebsiella grimontii strain 4928STDY7071314, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 112751 29 100.0 32 ............................. GTTACACGCAGGTTTCAGGCTCTGGCCTGAAT 112690 29 100.0 32 ............................. GCGCAGAAATAATGATAACTGGATTAATATTC 112629 29 100.0 32 ............................. GGGTATCCCATGCCTTTAGACTCTGAAGCCGC 112568 29 100.0 32 ............................. TTCGCCATATTCACAACGCCCGCGCCACCGGT 112507 29 100.0 32 ............................. ATACTTGATCGGTTTTGCCGTATTTTTTTGTT 112446 29 100.0 32 ............................. CATCACTGATAGCTTTCGGGATTTTGTTGATC 112385 29 100.0 32 ............................. TACGCCTTCTTGTTCGTCAGCGGGTCGACGTA 112324 29 100.0 32 ............................. TTTTTGGCTTGAAAATGCTTTTTGTGGATAAC 112263 29 100.0 32 ............................. CTGCTGGGCGTGGCCTGCGCTGTAAATACGTT 112202 29 100.0 32 ............................. GTTAATCATGCGGTTCGCCAGCTTATCAGTGA 112141 29 100.0 32 ............................. TGTTCGATATCACCGACGAGGTAGACATAGCG 112080 29 100.0 32 ............................. CTTATCTTGAGCAACCGCGCAACCGCCTTGGC 112019 29 100.0 32 ............................. TTTCTCCGCCCATAGGTACAGGGTTTGCGTAC 111958 29 100.0 32 ............................. CCTAAAACTGGCGTCACAACAATAAACACCGG 111897 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 15 29 100.0 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGATGCTGGTGAGATTGAGCCGCCTCAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GTAATATTCTATTAAATTTAATCAGTTAGGTAGTGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //