Array 1 11951-8034 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJSY01000096.1 Flavobacterium psychrophilum strain NNS5-1804 contig00096, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 11950 46 71.7 29 A.AA.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG T [11946] 11874 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 11798 46 100.0 29 .............................................. AAGTACATCCCCAGTATTGAAACTATGCG 11723 46 100.0 30 .............................................. AACACCCAAACATAAGAGATGAAACATAAG 11647 46 100.0 30 .............................................. GCAGACGCCCAAGGAATACAAGCAGCTGCA 11571 46 100.0 30 .............................................. CAGTTTTTTGAAATGGGTGTAGATATTCTT 11495 46 100.0 30 .............................................. TTGTCCATTCTAGCAGGTAGTAGAGATATA 11419 46 100.0 30 .............................................. ATTTCTTCATTAAGAAGCCGCACGTTAATA 11343 46 100.0 30 .............................................. AAGTCGTGAATAAAGATATACACGACCCTC 11267 46 100.0 30 .............................................. ACTATGATTTTTAATAATCGGATTACCTGC 11191 46 100.0 30 .............................................. TTTGAAATCTTTTCTTGCTTGTTCAGTTAA 11115 46 100.0 30 .............................................. TTTGGATCATTCCGCATATTTGCATCATGC 11039 46 100.0 30 .............................................. TGAAACTATTGAGGTAACAAATGAAATGTA 10963 46 100.0 30 .............................................. ACGACCTACCTTATTAACAAATGACTTTTC 10887 46 100.0 30 .............................................. ACGAATTAATAGCTTTTAATAACGCGTTAT 10811 46 100.0 30 .............................................. CTTTTGTGTTGTTTTATGTTGTACATTCGC 10735 46 100.0 29 .............................................. TAGATAAAAGAACCTTTTGTTCGTCTTTT 10660 46 100.0 30 .............................................. CTTTCGCAAAAGGAGTTGATTCAAAAAATG 10584 46 100.0 30 .............................................. AGAATAACAAGAGATACTAATACATCATTT 10508 46 100.0 30 .............................................. CTATTCATTGAATAAGCATTGAAGGTATCA 10432 46 100.0 30 .............................................. TTGATGACTGGGAGAGCCATTATGACGTAG 10356 46 100.0 29 .............................................. ACATTACAATATAATTACGGCTTTGAATA 10281 46 100.0 30 .............................................. TTTGCCCAACAGACCCTTCTCCTAATTCCG 10205 46 100.0 30 .............................................. ATTGAGGTACTTAACATTATTATCGCCACG 10129 46 100.0 30 .............................................. TGATTATGAGGTTTCTAATATAGAAAGGTC 10053 46 100.0 30 .............................................. AATCCCCCAGAAAACAAGCTAAATGATTCC 9977 46 100.0 29 .............................................. TTGTTCAATTTAATGAATAAGGTAATTGT 9902 46 100.0 30 .............................................. GGATAAATAGTATACGGCAAATCTAACTGA 9826 46 100.0 30 .............................................. CCATTTGGGAAGCACAATTTGGCGATTTCA 9750 46 100.0 30 .............................................. TAATTTAGAATTTTTCATTTTCCCTCATGG 9674 46 100.0 30 .............................................. TTATTGATACCTTATTTGAATCTACTTTTA 9598 46 100.0 30 .............................................. GCGTACTCACAAGGGAAGATTCATCCAACA 9522 46 100.0 30 .............................................. ACGCTTGACAAAAAATTAAGCCTATTTTTG 9446 46 100.0 29 .............................................. TCTCTGCTTCTAATGAACAGACTCTTTAT 9371 46 100.0 30 .............................................. CAGGTAAAAATCTAATAAGCGTACCAGGTA 9295 46 100.0 30 .............................................. CGTAACTGATCCACCGTGATTTACGTTTCC 9219 46 100.0 29 .............................................. ATAAAAAAGAAATAGAGAGTATAGATAGT 9144 46 100.0 30 .............................................. TTTTTTTAAAAACAGATAAAGAGCAACTTC 9068 46 100.0 31 .............................................. TGATGTTGTGGTTTATGATTTTGGTGATAAT 8991 46 100.0 30 .............................................. ATAGAAGATCAGCAAGAACTAGATAGTTTA 8915 46 100.0 30 .............................................. TTTAACGTTATGGTGCATTAGCAAAAAATA 8839 46 100.0 30 .............................................. TATCTGTTTGTTTGGTATCATTGCGGGTGC 8763 46 100.0 30 .............................................. GTTTATAAATGGAATGTATTTTAAAGTTCC 8687 46 100.0 30 .............................................. TGTACAATTGTTCATTTTTTGGTCTAGCAA 8611 46 100.0 30 .............................................. AAATATGCTTTCGTTTATGCCGACTAAAGC 8535 46 100.0 30 .............................................. TTACATACATAATCAATGGATATGGTTGTT 8459 46 100.0 30 .............................................. CCTGAATAGATTCTTTTCCGTATTGTTTTT 8383 46 100.0 30 .............................................. TCAAAGAATATAAAGACGCTAAAGATGCTG 8307 46 100.0 30 .............................................. TCACGATGTATTTAGAAAATATGGTTATCC 8231 46 100.0 30 .............................................. TGCTTGTAGTAGCTGTTAGTGGCATACCAC 8155 46 100.0 30 .............................................. CGCAAAAATATTATTACTAGGAGCAATCCT 8079 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 52 46 99.5 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : CACTTTGCGGGATAGTGTCATCA # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATCACACCAATTTTGCCATGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //