Array 1 22643-23473 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIYE01000005.1 Fructilactobacillus sanfranciscensis strain TMW 1.54 seq13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 22643 29 93.1 33 ......T.....................C ACGGCACACTCGTATTCTGGATAGGCTTTTTTG 22705 29 100.0 33 ............................. GGAATTGACGGCTACCATGCTTCTGCCGACATG 22767 29 96.6 32 ............................C GTCCCACGCAAGTCAGTCGCAAATTGTACACG 22828 29 100.0 33 ............................. CAAGTCTTGCGAATCATTCAATCCTTCGCCTTG 22890 29 96.6 32 ............T................ TTCTTCATGTTTCTGCTCGGCTGTGGCTCTAA 22951 29 96.6 32 ...........A................. ATCATGGCGATGAATTTGAAACTCAAAAATTA 23012 29 100.0 32 ............................. ATCTTTTTTTCGTGTTCAAAAAATTCCTTTCC 23073 29 100.0 33 ............................. TAACAGTTCTCATGGTATTTTGAGATATACATA 23135 29 100.0 33 ............................. ACTACTTGAAATGACGTACCTACAAAACCGATG 23197 29 100.0 32 ............................. ACTCATAAAACAAGCCTACAAGTTGAATTTGA 23258 29 100.0 33 ............................. ATAAATGTAATGAAAAGTGAGAGGGGGCTTAAA 23320 29 100.0 33 ............................. AAATTTTTCAGTTCACGCTTTTGGCTTTCATCA 23382 29 100.0 33 ............................. AGCAAGTACAGCATTATCTTATATCGTTGGTTA 23444 29 89.7 0 ..........................GTA | G [23467] ========== ====== ====== ====== ============================= ================================= ================== 14 29 98.0 33 GTATTCCCCACGCATGTGGGGGTGATCCT # Left flank : TTTGTTCGTGTTGGAAAATTTAGCTGGAGTTACTTTTGAAAAAACTAATTCTAACAAGAATCAAACTAGAGAATTACATTCATGGGCTTTTTATGATTTACAAACCAAATTAGCTTACAAAGCACGGAAAAATCAAAGTCAGGTCTTGATTGTATCAGCTAAATATACTAGCCAAAGATGCCCTAAATGCGGTCAAATCAGAAAAGAAAATCGTAATCATAAAATACATCGATACGACTGTGTTTTCTGTGGCTTTAAAACTAATGACGACCGGGTTGGAGCTATGAACTTGTACGAATTAGGCAAACAATATATTTTCGGAATCGAAAATCCTAAATTTGAATTAACTAACGTTACCGACTGATATGTTGGTAATCTAGGGTGCTGTCAACCACCCAAATGTAGCCACGTATAGTGTGGGAGCAATAAAGTTGCGTTATGACCACTGACCGCAAGGTCGTGAGTTACAAGCCTCTCACTTTAGTGAGGGGTAGTTGACT # Right flank : AGCTGATTCCTGAGACAACTTTTAAGAGAGCGTATAATGAATAAATCGTCTCTCAAAAGGAAGGAATTTTTACATGCCAACTCGTTACGACAAAGAATTCAAACAAAACATCATCAACCTATATAAACAAGGCGAATCAGCCGCCCAACTGGCCAGAGAATATGGCATTGGCTATTCAACCGTTCATAAGTGGATCCAGGGCCAAGCCAAAACTCAATCCGGTAAATCGCCAGACGAAATTAAAG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCATGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [4-4] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //