Array 1 421053-421750 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP017623.1 Enterococcus faecalis strain W11 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================== ================== 421053 37 97.3 29 ....................................A AAAGTTGAATATGTTTCGCTTTGGTGTAA 421119 37 100.0 30 ..................................... ATGATTGAAAATGGTTATGCTTTCGCCAGC 421186 37 97.3 29 ....................................C TGCCAGAGGGTATGCTAGGGGTAGGGCTA 421252 37 100.0 29 ..................................... CGTACAGCCATTCGTCTGGCATCTTCAAT 421318 37 97.3 29 ....................................A AGCACAAAAGGCTGAAGAACAAAAACAAC 421384 37 100.0 29 ..................................... GCATCTTTCAACACAGTGCGCTTTTCGAT 421450 37 97.3 29 ....................................T CTTCTAGCGTTTCAATGTCAATAGTTACA 421516 37 97.3 29 ....................................T TGATACGCTTCGTCCGTGTGATTGAGATA 421582 37 97.3 29 ....................................A AATACCGCTAGCATTGTAGCCACCAATCT 421648 37 100.0 29 ..................................... CAAAGCCTTTGGCAAACGCTCGAAGCACT 421714 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ============================== ================== 11 37 98.3 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACG # Left flank : CACAATTAAATGATAAACCAGAAGTCAAATCAATGATTGAGAAGTTAACTGGAACAATTAGTCAATTAATTGGCTATGAATTGTTGGAACATGAAATGGATTTGGAAGAAGATGGCATCACTGTGCAGGAACTTTTCAAAGCTCTTGGAATCAAAATCGAAACAACGAGTGATACGATTTTTGAAAAAGTTATGGAAATTACACAAGTACATCGTTATTTATCAAAGAAAAAATTATTGATTTTTATTAATGCGTGTACGTATTTGACAGAGGATGAAGTGCAACAAGTGGTAGAATATATCTCTTTAAATAATGTGGATGTCCTGTTTTTAGAACAAAGAGTGGTCCAGAACAGATTCCAATATATTTTGGACGAAAACTTTTATTTGAGTTATGAAAAAGCTTAAATTGTTATTGATTAGTGGTTCATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAGTACGGAACTTTGGAGAAAAAATAATTCTCCGAG # Right flank : TTAAACGTTCTATTCCCATTCGTTCCGACTGTTTTAGAGTCATGTTGTTTAGTTTTCGCAGATACGATTTGATTGATGTAAAAATATCGTTAATATGTATAAATGTGATTGTTATATAAAAAATATAAGTAATAAATTGAAGCTTTGCTAGAGCAAGTGACGCGATTACGAAATTATTTAATTTTAGAGTCACGTTATTTATTACTTTACGAATAGAGAATACGATTATCTATAAATCAAGAACTAATCCCCAATTTATTGAAAATGACACTCCCTGTTTTATTAATATTTCATGCTTTTGTTGTACTATTTGATGATACAAAAAAGTAAAACTGAGGACCCAATTAAAGTCAAGTTAACCACATTGAAAGATAAACCTTTCAATGTGGTTAAAGATGCTTAATGAGATTCATGAAACATAGAGAGCGGATTAATTTCCTATGTTCTTTATTTGTATATTTTCTTGGGAATCATTATTGATTGTGGATTAAAAAGATAAT # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 1700391-1700559 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP017623.1 Enterococcus faecalis strain W11 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 1700391 37 73.0 29 ..GA.A..TTGT..T.T...................A AAGGCACTCGTTACTACTTCAAAGTAGTT 1700457 37 100.0 29 ..................................... GATAGTTCTGAATAGTTGTGAATTTCATT 1700523 37 97.3 0 ....................................C | ========== ====== ====== ====== ===================================== ============================= ================== 3 37 90.1 30 GTTTTGGTACCATTCTAAACAACATGACTCTAAAACT # Left flank : CAAGTGCTAATCCTATTGAAAACGGTACGAAGAAAAAGTGGAAAACTGTTGTCATCGCAAATTGGATTCTCGCCAATGTTACAATATCAAACATATTATTTCCTCCCTGATTTGCCTCCACACAAAGAAACAAGCTTACCTGAATTGTTCATTTCCATTAGCGATGACTCCTTTTATCTACGAAACTAAAAGAAAATTCAAGTGAACTTTTCCAAAAAGTGTGAAAATGCATGTAATATAGAATAATTCCAATCTAAGTATACAACTTTCTGAGGCAGAAACCAAACAATACAGAAGCATTTCTCACAATTTTTTTAGGTGCTACCAAGATTTCTTCCCTTTCTTCTATCAATAAAAAAAGCCCTTCCTAAAAAAAGGAAGAACTAATCTCAATCTATCAACATTTTGACTTATCACTTGATTAGTTTTCGAAAATTGAAGCAGCTCGTCTTTGATGATAAAAATTCTAATCTTGTGATGAAAATTACGGATTGCTTGTG # Right flank : CTCGGAGAATTATTTTTTCTCCATGATTCCGTATTCGCATCACTTATCCATAGCTAGATTTCAGTTTAGAAGGTCTAATTTTTTTCTTCACGTTTATTATACCAAACTTTCTCCTTCTTGGCGGAAAAACCCACCATTTTTCAATGGTGGGTTTTCTTTATTTAGTAGCTGTAACAGCAAGCCAGATTTCACTATACTTAGCTTCTGCTGGTCCTTGATATTGCGTAAACGAAATTTCTGGTGCTGCAACGACTTGGTAACCAGATGAAGGCAACCATTCAGAGAATATCTTTGCCCAGGTTTCTTGTAAAGTTTGTGGGAAAGGACCTTCATTTGGAAAAACCGCCCATGTATGAGCAGGTACGCTTAGTTGCTCCAAATCTTCATAGGTATTTTCTTGCGAAGTGGCAAAGCCAATCATGTGTGTCATTTCTCCACCTTCTGTTGTTCGTCCCTCTTGAAAGTCAAAAGAAGCATTTACTACTTGATGAGGATATATG # Questionable array : NO Score: 3.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGGTACCATTCTAAACAACATGACTCTAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.42%AT] # Reference repeat match prediction: F [matched GTTTTGGTACCATTCTAAACAACATGACTCTAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //