Array 1 164464-162362 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFSR01000004.1 Jinshanibacter xujianqingii strain CF-509 Scaffold4_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 164463 28 100.0 33 ............................ TAACGGAGAATTTCCGGAGGCTAAATTATTCCA 164402 28 100.0 33 ............................ TAGCTATGCAGAATTAAGCCCATCTGGAAAAGG 164341 28 100.0 33 ............................ TTACCTAATGTTACAACAAAAACAGCAACTTTC 164280 28 100.0 33 ............................ TCATGCGGGACTTTGCATCATCACCGCGAGAGC 164219 28 100.0 33 ............................ TATGATATTGTGCACTTACATATATAAAGAGGA 164158 28 100.0 33 ............................ TGACCCCTGCTGAGCGTGCGAAATCAAATACCG 164097 28 100.0 33 ............................ TACAGCTCTTAGTTTATACGCCCGATATCGTTC 164036 28 100.0 33 ............................ CAATTCTTGGTCGGTATCTTTGTCCTGAGCTTC 163975 28 100.0 33 ............................ CTTATAACCATTTTTGGTAGTATAAGGCTTAAT 163914 28 100.0 33 ............................ CGCAAGTCTCGACCGTTGTCGCCATTCCAAGGA 163853 28 100.0 33 ............................ TGTGGTATTGTTTTTAGAAATGCAAGAATAAAT 163792 28 100.0 33 ............................ TATATATTCCTACATGATTTTGCGCTTGTTTAC 163731 28 100.0 33 ............................ TGATTATGCACTAACTGAGGGATATTAAAATGA 163670 28 100.0 33 ............................ TTTATTTTGCTTTATAAATTCAATAGCCTGAAA 163609 28 100.0 33 ............................ TGTTATGGTTGGTTCGCGAAGACATTTAAAAGA 163548 28 100.0 33 ............................ CTTTTTATTGCATGGAGTATCCGGAGGGGGTCG 163487 28 100.0 33 ............................ TTGATTGTTTAAAGTTTGATGCCTCATTAGCCC 163426 28 100.0 33 ............................ CGGGCGAGCCTATCATTGCCCGTGTAAGCCGCC 163365 28 100.0 34 ............................ CATATATGTGCGTCGTTCGCTGTGGCCACGTAAA 163303 28 100.0 33 ............................ CTAGAGAAAGCTAGCGCAACTTGATTTGGCGCA 163242 28 100.0 33 ............................ TTACGCTGTGATCTACTGCAAAAGTCGCAGTTT 163181 28 100.0 33 ............................ CATTAAGCAAACTGTCTTTTAAACTATCACCCT 163120 28 100.0 33 ............................ CGCGGCTGTCCATTAGCTTGTTTTCCTGCACCA 163059 28 100.0 33 ............................ CTAGTGGTAAAACCGACGAAGAAAAACGCGCTG 162998 28 100.0 33 ............................ TTATCATCATGGATTATCGATGTCGTTATCCCT 162937 28 100.0 33 ............................ TCAGGCCAGATACCAGCCGCTACGTTTTCACAG 162876 28 100.0 33 ............................ CTTTAACGAACTGACCCTTAACGGGATGGATGC 162815 28 100.0 33 ............................ CAAAGCCGAAGGTGTTAAAACGGCAATGGACAA 162754 28 100.0 33 ............................ TAGTTGGTACTCATATTGAAACTGGCGAGCAAA 162693 28 100.0 33 ............................ TATGTATCATGGACGGTCGTCCGTTAGGCATTT 162632 28 100.0 33 ............................ TAAATCCGCCGCACCTTTGCTGTGCGCTGGCAT 162571 28 100.0 33 ............................ TTCAAGAGGCCAGACATTTGGCGGCGCATAATG 162510 28 96.4 33 .............G.............. TTATTACTAATGCAAGACGCAAGTACACGCAAT 162449 28 96.4 33 ..................A......... CATGCAGACGGATAATGGGCAGGGTTTTAAGTG 162388 27 85.7 0 .......T..T..........-.....T | ========== ====== ====== ====== ============================ ================================== ================== 35 28 99.4 33 GTCTTCCCCACGCCAGTGGGGGTGTTTC # Left flank : TTATACAAAGAATCATTGTGTATTGATTTGGCATTTAGTCTTACTCGCGATATGGCGGGGAGTTATAACAAACAAAAGGTTTCTTCTTCGTTTCGTCAACGAGTTATTGAGATGGATCTGTTGGCGAGAGTTTCCAATGACATAACCACTTTGATGGGATTAAAGGATGCTCGTCGTAATCGCGAATGATCTACCTCCTGCAGTTCGGGGACGAATGAAACTTTGGTTTGTTGAACCCAAACCAAATGTTTTCGTTTCTGGTCTTAAGGATTCAGTCGCGATTAAAGTGACCGAATATCTGGTTGAGTACTGTCCGCCAGATGCTGGCGTTATTATCTTTCGCTCTCTACCTACACCTCCGGGATACAGCATTCGCATTATCGGTGCCACCAAAAAGCAACAGACAGAAATATCTGGTTTGCAGTTGGTATTCGAAACGTTGAGTCAACTCTAACCACAACATAGAGGTGACATACGTGGTTCTTTTACAATATATTGGT # Right flank : TGTAGTATTAACGAACTATGAGCCTGATATGTAACAGATGTCTTGCATATGGTATCACTGATAAATATATGAGAGGAGTTATGTCTGGAATCGAATGGTAATAAAAATCATATTTTTATTTAATTTTTATAAATCAATATGTTATTTTAAATTTTCGATAAAGGAGAGATAAATAATGAGGCTGGCTTGTGATAATCCAGCCTCATGCAAACATAACAAAATACTTAAAGCTCAAAATCACTTAAATCGTCAGCATTAACTTCAGAGTCAATCTGACCAACCAGATAAGAACTCACTTCAACTTCCTGAGGTGCTACCTGAACGTTGTCAGAAACTAACCAGGCGTTAATCCACGGAATTGGGTTGGAGCGGGTTTCAAACGGTAGCGTCAAACCAACTGCCTGCATACGGATGTTGGTAATATACTCCACATACTGGCAAAGAATATCTTTGTTCAGGCCAATCATAGAACCATCACGGAACAGATAGTCTGCCCACTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCAGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //