Array 1 1004272-1003145 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FLFX01000001.1 Klebsiella pneumoniae strain k2316, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	============================	==================================	==================
   1004271	    28	  92.9	    33	......................G.G...	CATATTGAAAGTCCGTCACGTTATCGTATTAAT 	
   1004210	    28	  96.4	    33	......................G.....	CGATCCCATTCTGACCATCTGCACCAGGATTCA 	
   1004149	    28	 100.0	    33	............................	TGAGCTATCCGGCCAGTGCGTCGCTGTAAATGG 	
   1004088	    28	 100.0	    33	............................	TTAAACGGGCGTTAAAATGCTATGTAGGACGGC 	
   1004027	    28	 100.0	    33	............................	TAGCGATTTTGTTAACGTCGTACGTGTGACCGG 	
   1003966	    28	 100.0	    33	............................	TCTGTCGGAAACGCTTCCCGGTACATGGGGAAG 	
   1003905	    28	 100.0	    33	............................	CAGAAAGTCTTTCCGCCATCTCGGTGACGAAGT 	
   1003844	    28	 100.0	    33	............................	TAACCGAAGATGGCGAAGCGATTGAAGGCGAGG 	
   1003783	    28	 100.0	    33	............................	CAGCAAACCATCTGCATAAGCAGGTGTCACGAT 	
   1003722	    28	 100.0	    33	............................	TATAACAGGGATTGGAGATAGCTTAACTGCTGG 	
   1003661	    28	 100.0	    33	............................	CTGAATATCTGCGCAACGGCCAGCATTGCGACC 	
   1003600	    28	 100.0	    33	............................	TATAGAAGGGGATATCTACACAAGGCAGGTTGG 	
   1003539	    28	 100.0	    33	............................	TATTCCCTGATGATTTATCAGTACGTCGCAGAC 	
   1003478	    28	  96.4	    33	A...........................	TTGATATAACAGGTCTTGAGGAAAAGGTTAATC 	
   1003417	    28	 100.0	    34	............................	TATGGGACTTGCCGCCAACTCCTTTTGATATTCG	
   1003355	    28	 100.0	    33	............................	TGGTTTATTGGCGCTAGTGAAGATGAGGTGTTG 	
   1003294	    28	 100.0	    33	............................	TGGTTTTCTTGACCTGGCGGCGGTAAACGCTGT 	
   1003233	    28	 100.0	    33	............................	TATCTCACCAGCCTTGATAACGTGCAGGCGCGC 	
   1003172	    28	 100.0	     0	............................	|                                 	
==========	======	======	======	============================	==================================	==================
        19	    28	  99.2	    33	GTCTTCCCCACGCACGTGGGGGTGTTTC	                                  	       

# Left flank :   TTTACAAAGAACGGCTCTGTATTGATTTGGCATTTTCACTCTCGAGGGAAATGGCGGGCCGCTACGATAAACACAAAGTCTCTGAGGCATTCAGAAAGCGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATCAATGAGCTGATGGGAGGGAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTCCGTGGACGAATGAAGCTGTGGTTTGTCGAACCCCGGCCAAATGTTTTTGTCTCAGGCGTCAAAGATTCGGTCGCACAAACCGTTGTTGATTACCTGTTGCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGTTATGAAATTCGCTACAAGGGTGAGGTCAGAAAGCCGATTATTGATCTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGAATATTGTGGTTAAACTCTCGCTCTTTCACAATATGTTGGT
# Right flank :  TTGTGAGGGGTCTACCAGCATTGGCGTACTGGAGTCTTCCCTACACATGTGGGACTTAGCAATAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGAAACTAAAATAATTTTTAGCTAATGAAACTGTCGTTTGGGAGAGGTAGGAATATTTTATTGCGATAGAGAAGGGAACTGTTTAAAGCAATAACGGCGAATGATTCTTATAAAATGAAGGATAGGGAATTCATATGTTTCGACTTTACCAGTCACATGATTTAATACGTCAATTAAATCCTGAAGACTTTCAATATATTTTGACACCAGCAGGTTCGCTAAGAGAAGCGTGTATACATTACGACCTCTCCTGTGAGGCGAATGGTCACAGCCTCGCTTTTGGCCTACCGAAGGAAATATACAACTCATCTCCACATAAAAGGCCATATGAACGAAGGCAACGTAGCTATGCAGATCCTATCTATGATGAGGTAGAGCACAGGCTACAAATTGGCTG

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTTCCCCACGCACGTGGGGGTGTTTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-10.80,-11.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [46.7-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.78,5.14   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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