Array 1 1670123-1666592 **** Predicted by CRISPRDetect 2.4 *** >NC_014654.1 Halanaerobium hydrogeniformans, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 1670122 37 100.0 35 ..................................... AGATTGCCATTGCGATCTCTGCAGTTATAATCGTG 1670050 37 100.0 36 ..................................... ATATCCTGTGTAGTATAGCCCAGGCCATCATATCTG 1669977 37 100.0 35 ..................................... TTGCCTGTAGTAATAGATGAGTTAGCCGGCTCGCT 1669905 37 100.0 36 ..................................... TTTCAAAAGTATTTGACTACACAAGACTCCCTATTA 1669832 37 100.0 36 ..................................... TCAGAGGTGGTTTTGATGATAATAGGGACGAGCTTG 1669759 37 100.0 36 ..................................... ATGTAAGCTCAACAGTTCCTCCGTTATTAGCACTCT 1669686 37 100.0 35 ..................................... AAGTTAAAAAGAAAAATTGAAAATGAATTATTAAA 1669614 37 100.0 37 ..................................... TTAAAGACTTAAATCTCATCAATCCTTCACCACCTTA 1669540 37 100.0 35 ..................................... TTGTTGAAGGATTGCTTCGTGGCGATGCTGAATCA 1669468 37 100.0 36 ..................................... TTAAATAAATAACACCATTCTTTTTCATAATTAATT 1669395 37 100.0 37 ..................................... TGGCTGGAGGAGTAACGAGGTTAGTTTGGGAAACTGA 1669321 37 100.0 36 ..................................... TGGCAACCAGGGTATCAACAAGGCGAACCTGATAGG 1669248 37 100.0 36 ..................................... TCAGGCTTGTTATCATCAATAAAAGCAGCTACCATT 1669175 37 100.0 36 ..................................... AAGCTATCAAGGTCGGGGAAGACGGAGAGGCTCACT 1669102 37 100.0 36 ..................................... CAGGAGCTTAAAAAGTACAACAAAGTAGGTAAAGTA 1669029 37 100.0 36 ..................................... CCCCTTTCCTGTTATCCTCTTAATTTCTTGGAATAT 1668956 37 100.0 35 ..................................... GCACAACATAAGATGGATGAGAAGTTGTTGCATTG 1668884 37 100.0 36 ..................................... GCTTATATAATGAGCCTTCCAGAAGACTGGGAGGTA 1668811 37 100.0 35 ..................................... ATTAGCATTTCTTCGTCATCAATATCCAATCTTAG 1668739 37 100.0 35 ..................................... ATTAATTTAGGGCATCCTGGATAAGCACATGGCTT 1668667 37 100.0 35 ..................................... ATGAAGGGAGATTAAATGATGCCAGATGAAAGAAA 1668595 37 100.0 35 ..................................... TTCGCTGCTACACAACAAGCCAAACCACTTGATGA 1668523 37 100.0 35 ..................................... TCAATCAGGTTAATGGCGGCGATGAGTGGTTAGTA 1668451 37 100.0 35 ..................................... TTGGTTGTTGGTGGTTTGGGCTGACTTTGTTGCGA 1668379 37 100.0 35 ..................................... TGTTCTCGTAGACGCTTTCGGCTTTCAGCTATCTT 1668307 37 100.0 36 ..................................... GGAGCATAATTATCCTTATCCCTCTTATGTTTGTTA 1668234 37 100.0 35 ..................................... AGGAGGTGGTTAAGTTATGAAAAAAGGTCAAGTAG 1668162 37 100.0 36 ..................................... TTTCTAGCATTTGTCCTTTCTCAATTAAAACATCTT 1668089 37 100.0 34 ..................................... ATATAGGTGAAGCTGCATAAGAATTTTCAACTAA 1668018 37 100.0 37 ..................................... AAATATTGAATATATAGGAGGAATAACAGATGGCAAT 1667944 37 100.0 37 ..................................... CACATATAAAGTGAATTCCATGCTTTACTGCTTAATT 1667870 37 100.0 37 ..................................... ATGCATTAAAGTATAAAACCCTGCCTACATCTAGCTT 1667796 37 100.0 36 ..................................... TATTTTGTTAACATAGCAAAAGGTGTCTGTATATTA 1667723 37 100.0 37 ..................................... GACATATCTGAGTAGCTCTCGCCACGATATAAACCCT 1667649 37 100.0 34 ..................................... TTGGTGCATATGAGGGCTATGTGTCTATGGATAA 1667578 37 100.0 37 ..................................... GTGTGATACTCCTATCATAGAAAACAACTACGAATGG 1667504 37 100.0 34 ..................................... AAGGATTCAAAAGTTTTTTTTAATTGTCCATCAT 1667433 37 100.0 36 ..................................... AAATAACTTAAATATTTTGACAAGTGTTATAAAACA 1667360 37 100.0 36 ..................................... AGGAATTAGGTAGAACTATCCAGCGAGAAGTTATAG 1667287 37 100.0 37 ..................................... CGAAATTTCCCAATTGCATTATAAAATCCTACAAAAA 1667213 37 100.0 35 ..................................... AAAATGGATATTTCCCAGATGTAAATGGAGAACTT 1667141 37 100.0 36 ..................................... ATCGGATCGAGATCAGTCTGCTCTTCATCGTTATTC 1667068 37 100.0 37 ..................................... ATCTGGATGAGATGGACGATCAGGATCAAGATGATGA 1666994 37 100.0 37 ..................................... TTAAAGACCAGATAAGTCAATTCGAAAACTCTCAAGG 1666920 37 100.0 35 ..................................... GAAAAAAACGCCGAGAACGCAAAAAGATATTTTGG 1666848 37 100.0 36 ..................................... TGTAATCTGTATTTGCATAGCTGCTAAAATCTTTAG 1666775 37 100.0 37 ..................................... TTTCGTAAACTAGAGCAAATAGTAGAGCCGGGCCAGG 1666701 37 100.0 36 ..................................... TTAAGTCCTAGTTACATTATACTTTACAGATTGAAA 1666628 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 49 37 100.0 36 GCTCCAATGACTAATCCATTAAAATAAGGATTGAAAC # Left flank : TTTTAAAGAGGTTAATAATTGGTAATATTCTTAGCTTTGCCAAAGGAATAAATTGGTGGATAGAAGAAAAAATAATTTTAGAAGCTAAATTAGAAGATATTTCTGTTCAGTTTAAAAATGAAGAAATGGTTGGTTTTAAAGGCCATTTTTATAGCAATATTTATTTACCAGAATTAATTGGTCTTGGAAAATCAACAAGTAGAGGATTTGGAACAATCAGACGAAAAAATCTTTTTGATTAAACTTGATTTTTAGGAAAAAACTATATAAAATTAAGCTAAGAAAGTTATAATTTAATTAATTCTGATCCAAAATTATTTAGCATAAAAAATTTGAACCTTTATAATTTCATATATAAAACTTTGGTCAAGATGGTCAAAACTGCGGCATTTGCATAAATTTTAATCATTTTATTAATATTTTTCAGAAAAAATATGCTTTAAAAATTCTAAAGTAATTGCTCTAATGCCTATCATAACAATAAATTAAAGTCGTAACGG # Right flank : CACGTGAAAATCAAACTATTCATTCAGTGAAAGTATGATTTTGCAATTTAATGCAGCAAGCTGCAATTTATACAGAATATAAAACAACAAAAACCCCCAAGAAACCTGCACTACCAGGCTAAACTTGGGGGAAATTCATATAGCTTATGCAGTTAAAGAACATTACTAACAAAATATTCAATTGCTTGAATAACAGCCATTTTCTTAATTTTTTTGTCATTTATTTTAGCGGATCTATAAAGTCCTAAAGCACAATAGAGGCCTGTATAATAGTGGGGATTCCAATTTGGGTTATAGTATTCAGCAAAAAGTTGATAAAGGTAGCTATTAGTATTTTTAAAATTATTATTTAAATTATAAAAGAGAAAAGACAGGCCATCTTGATAATTTGATAGAGTGAAATTATTTTTAAATTCCTGGTAACTTTCTGCAATTTGAGTTTCTTTTTTATTTATTTCAATAAGTTTTAGGCGTTTTTGATCAATGTTTTTATTGCCAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTCCAATGACTAATCCATTAAAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA //