Array 1 105161-103572 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTLK01000218.1 Klebsiella michiganensis strain DPB_3 Cont218, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 105160 28 100.0 32 ............................ TATAACTCGGCCACAGGTCGGCTTATCCTGAA 105100 28 100.0 32 ............................ ATCAGGCAAAACATTTCCTGCATGTTCGCGAT 105040 28 100.0 32 ............................ TGATCCGCAGATTGTACCGGCGTCGACCACAG 104980 28 100.0 32 ............................ AGACCGATTTTATCAGCCAGGGGGATGATCAC 104920 28 100.0 32 ............................ ATGTACTGTGCCAGCAGCTGAATGCGGAAGGG 104860 28 100.0 32 ............................ AATATAAATTGCCTGAATTTCTTGCGCGTACT 104800 28 96.4 32 ......................C..... ATTTGCCGAAAATGCTGCCGCAGTTGTATTTG 104740 28 100.0 32 ............................ AGTATCCTAAAGAACCGTTGCGGCGGCGGTTG 104680 28 100.0 33 ............................ TCTACGTACAGCAGAGTAAAGCATGAAGTCAGA 104619 28 100.0 32 ............................ TTCCTGGTTTCACCATCTACAGCTTTCACCTG 104559 28 100.0 32 ............................ TTCAGGGATATTCGCGATGTCCGCCTGAGCAG 104499 28 100.0 32 ............................ AGGTTGTGGTCATATCAACAACTGATGCACGC 104439 28 100.0 32 ............................ ACAAGTTGTAGGCGGCCATCAGGTAGAATTTT 104379 28 100.0 32 ............................ ACACCAAAATGGCTTCATGGCTCATTGAGTGG 104319 28 100.0 32 ............................ TCAGAGCGGTGATTTCTGCGAAGGTTGTAGAT 104259 28 100.0 32 ............................ TTACAGGTGACATCGCACACCCCTGATACCTC 104199 28 100.0 32 ............................ TGTGGCAGCCGAACAAAAACGGCGACGGGATT 104139 28 100.0 32 ............................ AGTGCAGCAAACCAGAGAAGGGCGCGCCGGCT 104079 28 100.0 32 ............................ AGAAGAAAAGGCAGACCCGATCAACGAAGAGA 104019 28 100.0 32 ............................ GTATTCGGTCCAGTGCCTGATGGCGCGGATGC 103959 28 100.0 32 ............................ CGCCGCGAAACTGGGCCACGCCTTCAGCTGCT 103899 28 100.0 32 ............................ ACCAACAAACTGCAGGCAGAGCAGAAAGCCGC 103839 28 96.4 32 ............G............... AAACTTCGCGCGGATTTCAGCGATTTTGTTTA 103779 28 96.4 32 ............G............... CGCTACTCCGCAAAAATGAAATTCGTGTGCTG 103719 28 100.0 32 ............................ ATGTTGCGGAGAATCCACAGCCTGTTCTCAGT 103659 28 100.0 32 ............................ TGCACGAAATCAACGTTGCCCGCTCGGTTGCC 103599 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 27 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTTATCCATCAGGTGGTGGATAAATTTATCGTCGAGCTGCAGGTTCAGCTGGATCAGAAAGGCGTCTCTTTGGAAGTCAGCCAGGAAGCCCGCGATTGGCTGGCCGAGAAAGGCTACGACCGGGCCATGGGCGCGCGTCCAATGGCGCGGGTGATTCAGGACAACCTGAAAAAACCGCTGGCCAATGAGCTGCTGTTTGGCTCACTGGTTGACGGCGGACAGGTGACCGTTGAACTGGATAAAGAGAAAAATGCGCTGACCTACGACTTCCAGAGTGCGCAGAAGCACAAACCGGAAGCTGCGCATTAAGTTTCGGTACTCAGTGACAAAACCGGCCTCAGGGCCGGTTTTTTTATGCCTATGTCCTGGACCCTTTTTTATTCCACTTTTTAACTTGTTGATTTTAATAAAGAGAAAATATAGCGTAAAATTATGGTGGCAGAGAGGATGTGTTGATTAATTTCAATGATAACAATATGGTAGGGTGTTGTTCGTTCA # Right flank : AGAGCTTGCCCACACTGCTGTGCAAGCCAAACGAGTCTAAAGAAATTGCCAAAGTAATAGGTTATTTTGCAAGTTGCGATGAATGTCACCGTATTGCATCTAATATACTGTTTTTATAAACAGCTATCGACTTTGAGCCACAGGATGTGACTATGCCCGCGAAGTATATTGCCCCCTCGGATTTAAAAACGATACTCCATTCAAAACGCGCCAACATTTACTATCTGGAAAAGTGTCGTGTGCAGGTTAATGGGGGGAGAGTGGAGTATGTTACCAGTGAGGGGCATGAGTAATTCTACTGGAATATCCCAATAGCAAATACAACGGCCATTATGCTAGGAATGGGAACCTCTGTTAGCCAGGCAGCGATGCGTGAGTTCGCCCGCGCGGGTGTGATGGTAGGTTTTTGTGGTACGGATGGCACACCTTTATATGCCGCCAATGAAGTCGATATCGACGTTTCCTGGCTATCGCCACAAAGTGAATATCGACCAACGGAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 57198-57592 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTLK01000169.1 Klebsiella michiganensis strain DPB_3 Cont169, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 57198 29 100.0 32 ............................. GCTATCAGCCTCGTTTTGTAATCCATGTTGCA 57259 29 100.0 32 ............................. AATCTTCTAAACGTGCTGGCTACGAACGTTTT 57320 29 100.0 32 ............................. TCGCGACAGATTGGGGCGACCTGGTATTTTGC 57381 29 100.0 32 ............................. TCTTCAGAGCGCACCCTTGCTGTTCAGGCTGC 57442 29 96.6 32 ............T................ CAATGGTAACAAGTGATCCGAGCGCAATCATC 57503 29 96.6 32 .............T............... GACTCACGAAACGCTTGGTTGATGTCTGAATG 57564 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGCATGCGCTGGTTAAAGCGAAAGTAGCCGTGACCGTTTTCCCGCCTTCCCCTGACGTTGCCTCTTTTAGCGGAATAACGGCGTTATTTCCCTTTATTCAACAGCCAACCCCATTACAGCAAAAAGCGCTTGAGCTGGATATTGATAAACAAGGTCCGCAATTATTTATTCTTGAAGATGTGACTGGTGCTGGAAAAACAGAGGCTGCGCTTATTTTGACACATCGCCTGATGGCTACGGGAAAGGCGCAGGGGCTCTATTTTGGTCTGCCGACGATGGCGACGGCGAATGCCATGTTCGATCGTATGTCGGAGAGCTGGCTGGCGTTGTATCAACCCAGTTCACGGCCAAGCCTGGTGCTGGCGCATAGCGCACGTGGATTAATGGATCGCTTCAATCAGTCTTTGTGGTCGGGAGATTTATCGGGTTCAGAAGAACCCGATGAGCTCCAGCCATCCAGCCAGGGATGCGCCGCCTGGTTTGCCGACAGTAATAAAAAA # Right flank : GCCCGGAGGAAACGTGGCAACAGTTCAATACACGTGTTCCCCGCGCCGCCATCCTTATTATCCTGTACTTTATTTTTTCCAGCATTCTTTAGTGTGGCAAAGTCCGCTTCCAGGTAATACTTGCCAAATTTTGGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACCGATGTTTTACCGATGCTGGGTTCCGAGCCCAAATCCAACCCGTCCTGCCAGACGCGCTGCCAGATATAAACCTGGCTGTCGGCGATGGATCGCGTGCTGGCAGCCAGTAGCAACAATGGTATTAAAAAATGAAAACGCATCATGGCGACAGGCCTTGTTGCCGGATTTTATCGTTAGTCTATTTTGAGGCGGGTCTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATACGCCCCGGCAGCGCTTTATCAATATACTGTAGGTTATCCAGCTGTACGTCATGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //